Factsheet for Solyc02g090970.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 2
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc03g005240.1.1
Solyc06g053930.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50310.1	Solyc01g008950.2.1	AT2G41090.1	17360592
AT3G50310.1	Solyc10g077010.1.1	AT2G41090.1	17360592
AT3G50310.1	Solyc10g081170.1.1	AT2G41090.1	17360592
AT3G50310.1	Solyc11g072240.1.1	AT2G41090.1	17360592
AT3G50310.1	Solyc12g099990.1.1	AT2G41090.1	17360592
AT3G50310.1	Solyc03g005240.1.1	AT4G14640.1	17360592
AT3G50310.1	Solyc06g053930.2.1	AT4G14640.1	17360592
AT3G50310.1	Solyc01g008950.2.1	AT5G21274.1	17360592
AT3G50310.1	Solyc10g077010.1.1	AT5G21274.1	17360592
AT3G50310.1	Solyc10g081170.1.1	AT5G21274.1	17360592
AT3G50310.1	Solyc11g072240.1.1	AT5G21274.1	17360592
AT3G50310.1	Solyc12g099990.1.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010342	Potato	cytosol, plastid	92.78	92.78
Solyc02g090980.1.1	Tomato	cytosol	76.39	77.46
Solyc02g090990.1.1	Tomato	cytosol	73.33	74.16
Solyc02g064980.1.1	Tomato	cytosol	65.83	66.02
KRH04602	Soybean	nucleus	49.72	52.49
KRH57939	Soybean	nucleus	47.5	50.15
KRH28462	Soybean	plastid	48.06	50.0
KRH28449	Soybean	plastid	36.67	49.81
KRH66431	Soybean	plastid	48.06	49.71
CDX83120	Canola	cytosol	46.67	49.56
Bra030001.1-P	Field mustard	cytosol	46.67	49.56
AT4G36950.1	Thale cress	plastid	45.83	49.11
KRH74789	Soybean	nucleus	44.72	49.09
KRH77009	Soybean	nucleus	46.67	48.55
AT5G67080.1	Thale cress	cytosol	45.83	47.97
Bra036070.1-P	Field mustard	cytosol	45.56	47.95
CDY30595	Canola	cytosol	45.56	47.95
CDY17760	Canola	cytosol	45.28	47.66
AT3G50310.1	Thale cress	cytosol	44.72	47.08
CDY12801	Canola	cytosol	45.0	46.82
VIT_07s0031g00530.t01	Wine grape	mitochondrion	47.78	46.61
CDX75628	Canola	plastid	45.83	46.61
Bra012131.1-P	Field mustard	cytosol	44.72	46.53
CDY01441	Canola	cytosol	44.72	46.53
Bra011739.1-P	Field mustard	plastid	45.56	46.33
CDX69280	Canola	plastid	45.0	45.89
Solyc06g065750.1.1	Tomato	mitochondrion	28.33	42.68
KRH66433	Soybean	cytosol, plastid	39.44	41.04
Solyc12g017710.1.1	Tomato	cytosol	19.72	40.11
GSMUA_Achr9P21940_001	Banana	cytosol, mitochondrion, peroxisome, plastid	42.78	38.79
Solyc06g066130.1.1	Tomato	mitochondrion	23.33	37.5
Solyc12g017740.1.1	Tomato	plasma membrane	21.67	37.32
Solyc07g051870.1.1	Tomato	mitochondrion	33.61	36.78
Solyc07g051890.1.1	Tomato	cytosol, mitochondrion, plastid	33.61	36.78
Solyc07g051920.1.1	Tomato	cytosol	32.78	36.65
Solyc06g065660.1.1	Tomato	cytosol	33.06	36.62
Solyc12g017760.1.1	Tomato	nucleus, plasma membrane, vacuole	16.39	36.42
Solyc07g051860.1.1	Tomato	cytosol	32.78	36.2
Solyc02g064930.1.1	Tomato	mitochondrion	31.94	36.16
Solyc06g065790.1.1	Tomato	mitochondrion	35.83	36.13
Solyc07g051880.1.1	Tomato	plastid	32.22	35.58
Solyc08g069090.1.1	Tomato	mitochondrion	31.39	35.31
Solyc03g117640.1.1	Tomato	nucleus	39.72	35.31
Solyc02g064870.1.1	Tomato	cytosol, mitochondrion, nucleus	28.06	33.55
Solyc01g103240.2.1	Tomato	cytosol	32.78	32.87
Solyc02g064880.1.1	Tomato	mitochondrion	20.56	32.74
Solyc07g051930.1.1	Tomato	cytosol	33.61	32.7
Solyc08g069070.1.1	Tomato	mitochondrion	29.17	32.51
GSMUA_Achr4P13370_001	Banana	cytosol	42.5	32.35
Solyc06g068510.1.1	Tomato	nucleus	36.94	31.22
Solyc08g076490.2.1	Tomato	cytosol, golgi, nucleus	31.11	29.71
Solyc02g064920.1.1	Tomato	mitochondrion	27.78	29.07
Solyc07g064820.1.1	Tomato	plastid	33.33	24.49
Solyc07g047910.1.1	Tomato	plasma membrane	32.78	24.33
Solyc11g006000.1.1	Tomato	nucleus	27.5	16.12
Solyc01g079750.2.1	Tomato	cytosol	30.56	15.99
Solyc07g053170.2.1	Tomato	cytosol	26.39	15.81
Solyc01g104530.2.1	Tomato	nucleus	26.39	14.29
Solyc02g065110.2.1	Tomato	nucleus, plastid	24.72	14.13
Solyc12g088940.1.1	Tomato	plastid	26.11	13.82
Solyc02g090430.2.1	Tomato	nucleus, plastid	24.44	13.79
Solyc04g064590.1.1	Tomato	nucleus	12.5	13.47
Solyc04g079400.2.1	Tomato	plastid	25.56	12.87
Solyc08g081210.2.1	Tomato	nucleus, plastid	28.89	12.38
Solyc06g036080.2.1	Tomato	cytosol	29.17	11.5
Solyc03g025360.2.1	Tomato	cytosol	27.78	11.24
Solyc01g098980.2.1	Tomato	cytosol	31.11	6.92
Solyc11g033270.1.1	Tomato	cytosol	24.72	6.35

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007154
GO:GO:0007165	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147	InterPro:IPR000719
UniProt:K4BCP6	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF334	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc02g090970.1	EnsemblPlants:Solyc02g090970.1.1	UniParc:UPI00027677B7	:

Description

No Description!

Coordinates

chr2:+:52424627..52425709

Molecular Weight (calculated)

40104.7 Da

IEP (calculated)

4.754

GRAVY (calculated)

-0.357

Length

360 amino acids

Sequence
(BLAST)

001: MDWVRGETVG HGSFGKVSFV IPRNQSTLFS PSMVVKSCSA SCSATLMNEK IILDELKGCP QIINCVGDSY SYENGEKLYN VLLEYACGGA LSDKLKNSGD
101: QRLPELEVRE YTKGLLRGIH YIHKNGFVHC DIKLPNILLG ENGQVKIADF GLAKRAESKR DDKLRCELRG TPLYMSPEMV IGGEQNTPAD IWALGCVVAE
201: MATGNPVWRC LDISKLLMTI GLGDQLPEIP QNLSEEGKDF LEKCLMKDPK KRWTAEMLLE HPFVADEDDT VLLNYERCNS GSPSTSPRCP FDFPDWVSNN
301: SAESSVTCSI TSLPSPAFQE LMNWNDGSWS TSPTERIREL VCERKPESEW STADGWVSVR

Best Arabidopsis Sequence Match ( AT4G36950.1 )
(BLAST)

001: MEWIRRETIG HGSFSTVSLA TTSGSSSKAF PSLMAVKSSG VVCSAALRNE RDVLDDLGDC SEIVRCFGEG RTVENGEEIY NLFLEYASGG SLADRIKSSG
101: EALPEFEVRR FTRSIVKGLC HIHGNGFTHC DIKLENVLVF GDGDVKISDF GLAKRRSGEV CVEIRGTPLY MAPESVNHGE FESPADIWAL GCSVVEMSSG
201: KTAWCLEDGV MNNVMSLLVR IGSGDEVPRI PVELSEEGKD FVSKCFVKNA AERWTAEMLL DHPFLAVDDE SGEEDEACSV SPRNPFDFPG WNSVQSPVND
301: SVMFGSLVGS PEERISGLVS EKVPDWSVSC DWVNVR

Arabidopsis Description

MAPKKK21Mitogen-activated protein kinase kinase kinase 21 [Source:UniProtKB/TrEMBL;Acc:Q6K1M3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.