Factsheet for Solyc12g017740.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
plasma membrane 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g017760.1.1	Tomato	nucleus, plasma membrane, vacuole	61.24	79.01
PGSC0003DMT400090482	Potato	extracellular, mitochondrion, plasma membrane, plastid	59.81	69.06
Solyc06g065750.1.1	Tomato	mitochondrion	75.6	66.11
PGSC0003DMT400067129	Potato	mitochondrion	63.64	54.29
Solyc12g017710.1.1	Tomato	cytosol	44.02	51.98
Solyc06g065790.1.1	Tomato	mitochondrion	80.86	47.34
Solyc06g066130.1.1	Tomato	mitochondrion	46.41	43.3
PGSC0003DMT400092021	Potato	cytosol	39.71	41.92
Solyc02g064880.1.1	Tomato	mitochondrion	40.67	37.61
Solyc06g065660.1.1	Tomato	cytosol	54.07	34.77
Solyc02g064930.1.1	Tomato	mitochondrion	49.76	32.7
Solyc02g064870.1.1	Tomato	cytosol, mitochondrion, nucleus	43.06	29.9
Solyc02g064920.1.1	Tomato	mitochondrion	42.11	25.58
Solyc08g069090.1.1	Tomato	mitochondrion	33.49	21.88
Solyc02g090970.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	37.32	21.67
Solyc02g064980.1.1	Tomato	cytosol	36.84	21.45
CDY66991	Canola	cytosol	29.19	20.96
CDY07592	Canola	mitochondrion	33.01	20.78
Solyc08g069070.1.1	Tomato	mitochondrion	32.06	20.74
Solyc02g090990.1.1	Tomato	cytosol	34.93	20.51
CDY05900	Canola	mitochondrion	32.54	20.24
AT2G18530.1	Thale cress	extracellular	20.57	20.19
Bra018010.1-P	Field mustard	mitochondrion	31.58	20.12
Solyc02g090980.1.1	Tomato	cytosol	33.97	20.0
Solyc08g076490.2.1	Tomato	cytosol, golgi, nucleus	35.89	19.89
VIT_07s0130g00300.t01	Wine grape	nucleus	35.89	19.58
CDY08107	Canola	mitochondrion	30.62	19.51
Solyc07g051870.1.1	Tomato	mitochondrion	30.62	19.45
Solyc07g051860.1.1	Tomato	cytosol	30.14	19.33
Solyc07g051880.1.1	Tomato	plastid	30.14	19.33
Solyc07g051920.1.1	Tomato	cytosol	29.67	19.25
Solyc07g051890.1.1	Tomato	cytosol, mitochondrion, plastid	30.14	19.15
AT3G45790.1	Thale cress	cytosol	33.97	18.88
AT3G46140.1	Thale cress	cytosol	33.97	18.88
Solyc03g117640.1.1	Tomato	nucleus	35.41	18.27
AT3G45670.1	Thale cress	nucleus	33.01	18.21
Bra025496.1-P	Field mustard	cytosol	17.22	18.18
CDX86063	Canola	nucleus	32.54	18.09
Solyc06g068510.1.1	Tomato	nucleus	36.84	18.08
CDX99124	Canola	nucleus	32.54	17.99
Bra013996.1-P	Field mustard	mitochondrion	33.01	17.78
CDY39740	Canola	cytosol	16.75	17.68
Solyc01g103240.2.1	Tomato	cytosol	30.14	17.55
Solyc07g051930.1.1	Tomato	cytosol	29.67	16.76
Bra018220.1-P	Field mustard	nucleus	32.54	16.59
CDX68367	Canola	nucleus	30.62	15.92
Solyc04g064590.1.1	Tomato	nucleus	22.97	14.37
AT3G46160.1	Thale cress	cytosol, nucleus, plastid	26.79	14.25
Solyc07g047910.1.1	Tomato	plasma membrane	31.58	13.61
Solyc07g064820.1.1	Tomato	plastid	26.79	11.43
Solyc02g065110.2.1	Tomato	nucleus, plastid	29.67	9.84
Solyc11g006000.1.1	Tomato	nucleus	28.71	9.77
Solyc02g090430.2.1	Tomato	nucleus, plastid	28.71	9.4
Solyc01g079750.2.1	Tomato	cytosol	30.14	9.16
Solyc01g104530.2.1	Tomato	nucleus	28.71	9.02
Solyc07g053170.2.1	Tomato	cytosol	25.84	8.99
Solyc12g088940.1.1	Tomato	plastid	28.23	8.68
Solyc04g079400.2.1	Tomato	plastid	28.23	8.25
Solyc08g081210.2.1	Tomato	nucleus, plastid	29.19	7.26
Solyc03g025360.2.1	Tomato	cytosol	27.75	6.52
Solyc06g036080.2.1	Tomato	cytosol	27.75	6.35
Solyc01g098980.2.1	Tomato	cytosol	30.14	3.89
Solyc11g033270.1.1	Tomato	cytosol	23.45	3.5

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007154
GO:GO:0007165	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147	InterPro:IPR000719
UniProt:K4DDA2	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF334	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc12g017740.1
EnsemblPlants:Solyc12g017740.1.1	UniParc:UPI0002769582	:	:	:	:

Description

No Description!

Coordinates

chr12:+:7339551..7340180

Molecular Weight (calculated)

23179.2 Da

IEP (calculated)

7.499

GRAVY (calculated)

0.056

Length

209 amino acids

Sequence
(BLAST)

001: MTGLSWKRGT TLHEGGFGAI SLASTSNALF CGVTLPSLIA LKSCDFNASQ SLKEEVEILL MFKHSPYIVH YFGSNVSFDD NVNLYNLLLE YASGGSLADH
101: RQNCNSLLQF EDKKHRKNVL LGLSCIHNNG IIYCDIKPGN ILLVGMDKIA KIGNFGLSVT LEQGMNQKQE VIRGIERYMA LKSVINTEYS PRVNIWVLGC
201: TVYELIMGH

Best Arabidopsis Sequence Match ( AT4G36950.1 )
(BLAST)

001: MEWIRRETIG HGSFSTVSLA TTSGSSSKAF PSLMAVKSSG VVCSAALRNE RDVLDDLGDC SEIVRCFGEG RTVENGEEIY NLFLEYASGG SLADRIKSSG
101: EALPEFEVRR FTRSIVKGLC HIHGNGFTHC DIKLENVLVF GDGDVKISDF GLAKRRSGEV CVEIRGTPLY MAPESVNHGE FESPADIWAL GCSVVEMSSG
201: KTAWCLEDGV MNNVMSLLVR IGSGDEVPRI PVELSEEGKD FVSKCFVKNA AERWTAEMLL DHPFLAVDDE SGEEDEACSV SPRNPFDFPG WNSVQSPVND
301: SVMFGSLVGS PEERISGLVS EKVPDWSVSC DWVNVR

Arabidopsis Description

MAPKKK21Mitogen-activated protein kinase kinase kinase 21 [Source:UniProtKB/TrEMBL;Acc:Q6K1M3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.