Factsheet for PGSC0003DMT400067129

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400092021	Potato	cytosol	63.67	78.79
Solyc12g017760.1.1	Tomato	nucleus, plasma membrane, vacuole	48.57	73.46
PGSC0003DMT400090482	Potato	extracellular, mitochondrion, plasma membrane, plastid	53.88	72.93
Solyc12g017740.1.1	Tomato	plasma membrane	54.29	63.64
PGSC0003DMT400052702	Potato	mitochondrion	83.67	60.29
PGSC0003DMT400067126	Potato	mitochondrion	83.67	57.42
PGSC0003DMT400052710	Potato	mitochondrion, plastid	66.53	51.58
PGSC0003DMT400068616	Potato	cytosol, mitochondrion	34.69	49.42
PGSC0003DMT400052693	Potato	cytosol	65.71	48.79
PGSC0003DMT400052743	Potato	cytosol	65.31	48.48
PGSC0003DMT400067115	Potato	mitochondrion	42.45	35.86
Solyc12g017710.1.1	Tomato	cytosol	25.71	35.59
PGSC0003DMT400067198	Potato	mitochondrion	43.67	34.19
PGSC0003DMT400090575	Potato	cytosol	42.86	32.11
PGSC0003DMT400024024	Potato	cytosol	20.82	31.68
PGSC0003DMT400083928	Potato	cytosol	23.27	28.36
PGSC0003DMT400090653	Potato	cytosol	32.24	28.11
PGSC0003DMT400044025	Potato	mitochondrion	33.47	27.24
PGSC0003DMT400044024	Potato	mitochondrion	33.06	26.91
PGSC0003DMT400076066	Potato	mitochondrion	23.27	24.36
PGSC0003DMT400065492	Potato	nucleus	31.84	21.91
PGSC0003DMT400010342	Potato	cytosol, plastid	31.43	21.39
PGSC0003DMT400010341	Potato	cytosol	30.61	21.07
PGSC0003DMT400075969	Potato	golgi, mitochondrion	26.94	20.31
PGSC0003DMT400038374	Potato	cytosol, mitochondrion, plasma membrane, plastid	23.27	20.28
PGSC0003DMT400010340	Potato	nucleus	28.98	19.72
PGSC0003DMT400092406	Potato	cytosol	28.16	19.71
PGSC0003DMT400072002	Potato	mitochondrion	27.35	19.25
PGSC0003DMT400090976	Potato	mitochondrion	25.31	18.4
PGSC0003DMT400036857	Potato	mitochondrion	29.8	18.02
PGSC0003DMT400038864	Potato	extracellular	24.49	17.86
AT2G18530.1	Thale cress	extracellular	15.51	17.84
PGSC0003DMT400024020	Potato	cytosol	20.82	17.77
CDY07592	Canola	mitochondrion	23.67	17.47
PGSC0003DMT400038860	Potato	cytosol	23.67	17.37
CDY66991	Canola	cytosol	20.41	17.18
Bra018010.1-P	Field mustard	mitochondrion	22.86	17.07
CDY05900	Canola	mitochondrion	23.27	16.96
PGSC0003DMT400064172	Potato	cytosol	24.49	16.9
PGSC0003DMT400073303	Potato	nucleus	29.8	16.9
CDY08107	Canola	mitochondrion	22.45	16.77
PGSC0003DMT400038863	Potato	cytosol, mitochondrion, plastid	22.86	16.77
VIT_07s0130g00300.t01	Wine grape	nucleus	26.12	16.71
AT3G46140.1	Thale cress	cytosol	25.31	16.49
AT3G45790.1	Thale cress	cytosol	25.31	16.49
Bra013996.1-P	Field mustard	mitochondrion	25.31	15.98
CDX86063	Canola	nucleus	24.08	15.69
PGSC0003DMT400067237	Potato	cytosol	18.37	15.46
CDX99124	Canola	nucleus	23.27	15.08
AT3G45670.1	Thale cress	nucleus	23.27	15.04
PGSC0003DMT400038861	Potato	plastid	23.27	15.04
Bra018220.1-P	Field mustard	nucleus	23.67	14.15
AT3G46160.1	Thale cress	cytosol, nucleus, plastid	21.63	13.49
CDX68367	Canola	nucleus	21.63	13.18
Bra025496.1-P	Field mustard	cytosol	10.2	12.63
CDY39740	Canola	cytosol	10.2	12.63
PGSC0003DMT400063858	Potato	cytosol	20.82	12.29
PGSC0003DMT400057171	Potato	plastid	22.45	11.98
PGSC0003DMT400073788	Potato	nucleus	21.63	8.63
PGSC0003DMT400023236	Potato	cytosol	24.08	8.58
PGSC0003DMT400001980	Potato	nucleus, plastid	21.63	8.43
PGSC0003DMT400026093	Potato	nucleus, plastid	21.22	8.11
PGSC0003DMT400039936	Potato	plastid	21.22	7.6
PGSC0003DMT400020760	Potato	plastid	21.63	7.48
PGSC0003DMT400061014	Potato	mitochondrion	19.59	7.21
PGSC0003DMT400031805	Potato	cytosol	22.04	6.18
PGSC0003DMT400040869	Potato	cytosol	22.04	6.07
PGSC0003DMT400088687	Potato	cytosol	4.08	4.98
PGSC0003DMT400019785	Potato	plastid	1.63	0.59

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1CGR1	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400026097	PGSC:PGSC0003DMG400026097	EnsemblPlants:PGSC0003DMT400067129
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF334	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295571A	SEG:seg

Description

Protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400026097]

Coordinates

chr6:-:45892595..45893605

Molecular Weight (calculated)

27249.5 Da

IEP (calculated)

10.358

GRAVY (calculated)

-0.134

Length

245 amino acids

Sequence
(BLAST)

001: MAGLLWKRGT TLGQGGFGVV SLASTSNALF RGVTLPSLIA LKSCNYGASQ SLKEEVEILQ MFKHSPYIVH CFGANVSFED NVNLYNLLLE YASGGSLADR
101: LQNCNSLSES EVKKHTKNVL LGLNCIHNKG IIHCDIKLGN ILLVRRDKTA KIAYFGLFVT VEQGMDHIKS SSKVANTTKT RKKKIDSMYL LHKKLLDPNP
201: LLDKPIKKIT FKFGNHNFSR QLLDPKPLLH KPIQKITFKI GSPQI

Best Arabidopsis Sequence Match ( AT3G50310.1 )
(BLAST)

001: MEWVRGETIG FGTFSTVSTA TKSRNSGDFP ALIAVKSTDA YGAASLSNEK SVLDSLGDCP EIIRCYGEDS TVENGEEMHN LLLEYASRGS LASYMKKLGG
101: EGLPESTVRR HTGSVLRGLR HIHAKGFAHC DIKLANILLF NDGSVKIADF GLAMRVDGDL TALRKSVEIR GTPLYMAPEC VNDNEYGSAA DVWALGCAVV
201: EMFSGKTAWS VKEGSHFMSL LIRIGVGDEL PKIPEMLSEE GKDFLSKCFV KDPAKRWTAE MLLNHSFVTI DLEDDHRENF VVKVKDEDKV LMSPKCPFEF
301: DDWDSFTLDS NPSFDSPVER LGSLVSGSIP DWSVGGSWLT VR

Arabidopsis Description

MAPKKK20MKKK20 [Source:UniProtKB/TrEMBL;Acc:A0A178VGW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.