Factsheet for PGSC0003DMT400036857

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 24351685

msms PMID: 24351685 doi

F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller

Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g117640.1.1	Tomato	nucleus	95.8	95.8
PGSC0003DMT400073303	Potato	nucleus	74.57	69.91
PGSC0003DMT400044025	Potato	mitochondrion	30.37	40.86
PGSC0003DMT400044024	Potato	mitochondrion	30.12	40.53
PGSC0003DMT400065492	Potato	nucleus	35.06	39.89
PGSC0003DMT400052743	Potato	cytosol	31.85	39.09
PGSC0003DMT400010342	Potato	cytosol, plastid	34.57	38.89
PGSC0003DMT400052693	Potato	cytosol	31.6	38.79
PGSC0003DMT400010341	Potato	cytosol	34.07	38.76
PGSC0003DMT400068616	Potato	cytosol, mitochondrion	16.3	38.37
PGSC0003DMT400010340	Potato	nucleus	33.83	38.06
PGSC0003DMT400052710	Potato	mitochondrion, plastid	29.63	37.97
PGSC0003DMT400083928	Potato	cytosol	18.77	37.81
PGSC0003DMT400090482	Potato	extracellular, mitochondrion, plasma membrane, plastid	16.79	37.57
PGSC0003DMT400090575	Potato	cytosol	28.89	35.78
PGSC0003DMT400052702	Potato	mitochondrion	29.88	35.59
PGSC0003DMT400067115	Potato	mitochondrion	25.43	35.52
PGSC0003DMT400067198	Potato	mitochondrion	27.41	35.46
PGSC0003DMT400024024	Potato	cytosol	14.07	35.4
PGSC0003DMT400067126	Potato	mitochondrion	31.11	35.29
PGSC0003DMT400038374	Potato	cytosol, mitochondrion, plasma membrane, plastid	23.7	34.16
PGSC0003DMT400090653	Potato	cytosol	23.7	34.16
PGSC0003DMT400092406	Potato	cytosol	27.65	32.0
PGSC0003DMT400067237	Potato	cytosol	22.96	31.96
PGSC0003DMT400075969	Potato	golgi, mitochondrion	25.19	31.38
PGSC0003DMT400024020	Potato	cytosol	22.22	31.36
PGSC0003DMT400072002	Potato	mitochondrion	26.42	30.75
PGSC0003DMT400038860	Potato	cytosol	24.94	30.24
PGSC0003DMT400038864	Potato	extracellular	24.94	30.06
PGSC0003DMT400067129	Potato	mitochondrion	18.02	29.8
PGSC0003DMT400038863	Potato	cytosol, mitochondrion, plastid	24.44	29.64
PGSC0003DMT400090976	Potato	mitochondrion	24.44	29.38
PGSC0003DMT400088687	Potato	cytosol	13.83	27.86
PGSC0003DMT400064172	Potato	cytosol	24.2	27.61
PGSC0003DMT400038861	Potato	plastid	24.69	26.39
PGSC0003DMT400076066	Potato	mitochondrion	14.57	25.21
PGSC0003DMT400092021	Potato	cytosol	11.85	24.24
PGSC0003DMT400057171	Potato	plastid	26.17	23.09
PGSC0003DMT400063858	Potato	cytosol	21.23	20.72
PGSC0003DMT400073788	Potato	nucleus	24.69	16.29
PGSC0003DMT400001980	Potato	nucleus, plastid	23.21	14.94
PGSC0003DMT400026093	Potato	nucleus, plastid	22.72	14.35
PGSC0003DMT400061014	Potato	mitochondrion	23.46	14.26
PGSC0003DMT400023236	Potato	cytosol	23.95	14.1
PGSC0003DMT400020760	Potato	plastid	22.96	13.12
PGSC0003DMT400039936	Potato	plastid	21.73	12.87
PGSC0003DMT400031805	Potato	cytosol	25.19	11.67
PGSC0003DMT400040869	Potato	cytosol	24.94	11.35
PGSC0003DMT400019785	Potato	plastid	1.73	1.03

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102588748	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1B4D0	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400014213	PGSC:PGSC0003DMG400014213
EnsemblPlants:PGSC0003DMT400036857	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF475
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029610C7
RefSeq:XP_006341415.1	:	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400014213]

Coordinates

chr3:-:57323893..57325825

Molecular Weight (calculated)

44912.1 Da

IEP (calculated)

4.382

GRAVY (calculated)

-0.360

Length

405 amino acids

Sequence
(BLAST)

001: MMKNEFGDGV AWYRGAMVGK GSFGCVYLAT LKNPKLNYSY FPPAMAVKSA EVSVSGSIQK EKEVLNNIKG CPYIIRCFGD ETTTGQNGAM VYNLLLEYGS
101: GGTLAERINK SGLSEFEVRN HTRSMLRGLL CIHTIGYVHC DMKPENVLLV PNSSKGSTEF KVKIGDLGLA KRENQSKKRR LEPYWRGTPM YLSPEAVADN
201: VQECPADIWA LGCIVLEMLT GKPPWDRDDD MDAEDVLRKI GGGKELPKIP GNLSKDAKDF LKGCFVRNPR YRWTAEMLLN HPFVDGLVED EGVEQPLEVE
301: DINIIDSILL VTESDDEFAY YSEDWSGASE DDSLGYWSEE DYEDEMTSYF DEEEIFKVEK SITVISSAID GGSDHVIDPL VEVPSGSPSN NSPKCPLSIT
401: IPAGV

Best Arabidopsis Sequence Match ( AT5G67080.1 )
(BLAST)

001: MEWIRGETIG YGTFSTVSLA TRSNNDSGEF PPLMAVKSAD SYGAASLANE KSVLDNLGDD CNEIVRCFGE DRTVENGEEM HNLFLEYASR GSLESYLKKL
101: AGEGVPESTV RRHTGSVLRG LRHIHANGFA HCDLKLGNIL LFGDGAVKIA DFGLAKRIGD LTALNYGVQI RGTPLYMAPE SVNDNEYGSE GDVWALGCVV
201: VEMFSGKTAW SLKEGSNFMS LLLRIGVGDE VPMIPEELSE QGRDFLSKCF VKDPKKRWTA EMLLNHPFVT VDVDHDVLVK EEDFVVNMKT EDVSTSPRCP
301: FEFPDWVSVS SGSQTIDSPD ERVASLVTDM IPDWSVTNSW VTVR

Arabidopsis Description

MAPKKK19Mitogen-activated protein kinase kinase kinase 19 [Source:UniProtKB/TrEMBL;Acc:Q9FHA5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.