Factsheet for PGSC0003DMT400052693

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052743	Potato	cytosol	97.58	97.58
PGSC0003DMT400067126	Potato	mitochondrion	78.79	72.83
PGSC0003DMT400090482	Potato	extracellular, mitochondrion, plasma membrane, plastid	39.7	72.38
PGSC0003DMT400052702	Potato	mitochondrion	74.55	72.35
PGSC0003DMT400052710	Potato	mitochondrion, plastid	68.18	71.2
PGSC0003DMT400067129	Potato	mitochondrion	48.79	65.71
PGSC0003DMT400092021	Potato	cytosol	36.97	61.62
PGSC0003DMT400067198	Potato	mitochondrion	55.45	58.47
PGSC0003DMT400067115	Potato	mitochondrion	50.91	57.93
PGSC0003DMT400068616	Potato	cytosol, mitochondrion	28.18	54.07
PGSC0003DMT400090575	Potato	cytosol	52.12	52.6
PGSC0003DMT400090653	Potato	cytosol	43.33	50.89
PGSC0003DMT400044025	Potato	mitochondrion	44.24	48.51
PGSC0003DMT400044024	Potato	mitochondrion	43.64	47.84
PGSC0003DMT400083928	Potato	cytosol	22.42	36.82
PGSC0003DMT400010342	Potato	cytosol, plastid	38.79	35.56
PGSC0003DMT400024024	Potato	cytosol	16.97	34.78
PGSC0003DMT400010341	Potato	cytosol	37.27	34.55
PGSC0003DMT400010340	Potato	nucleus	37.58	34.44
PGSC0003DMT400065492	Potato	nucleus	36.97	34.27
PGSC0003DMT400075969	Potato	golgi, mitochondrion	33.03	33.54
AT2G18530.1	Thale cress	extracellular	21.52	33.33
PGSC0003DMT400038374	Potato	cytosol, mitochondrion, plasma membrane, plastid	28.18	33.1
CDY66991	Canola	cytosol	28.18	31.96
PGSC0003DMT400036857	Potato	mitochondrion	38.79	31.6
PGSC0003DMT400024020	Potato	cytosol	27.27	31.36
PGSC0003DMT400038864	Potato	extracellular	31.52	30.95
CDY07592	Canola	mitochondrion	30.91	30.72
Bra018010.1-P	Field mustard	mitochondrion	30.3	30.49
CDY05900	Canola	mitochondrion	30.91	30.36
PGSC0003DMT400092406	Potato	cytosol	31.82	30.0
PGSC0003DMT400090976	Potato	mitochondrion	30.61	29.97
CDY08107	Canola	mitochondrion	29.39	29.57
AT3G45670.1	Thale cress	nucleus	33.94	29.55
VIT_07s0130g00300.t01	Wine grape	nucleus	34.24	29.5
PGSC0003DMT400038863	Potato	cytosol, mitochondrion, plastid	29.7	29.34
PGSC0003DMT400038860	Potato	cytosol	29.7	29.34
PGSC0003DMT400072002	Potato	mitochondrion	30.91	29.31
PGSC0003DMT400067237	Potato	cytosol	25.76	29.21
PGSC0003DMT400073303	Potato	nucleus	38.18	29.17
AT3G46140.1	Thale cress	cytosol	32.42	28.46
PGSC0003DMT400064172	Potato	cytosol	29.09	27.04
PGSC0003DMT400038861	Potato	plastid	30.61	26.65
AT3G45790.1	Thale cress	cytosol	30.3	26.6
CDX86063	Canola	nucleus	30.3	26.6
PGSC0003DMT400088687	Potato	cytosol	16.06	26.37
Bra025496.1-P	Field mustard	cytosol	15.76	26.26
CDY39740	Canola	cytosol	15.76	26.26
Bra013996.1-P	Field mustard	mitochondrion	30.61	26.03
Bra018220.1-P	Field mustard	nucleus	31.82	25.61
AT3G46160.1	Thale cress	cytosol, nucleus, plastid	30.3	25.45
PGSC0003DMT400076066	Potato	mitochondrion	17.88	25.21
CDX68367	Canola	nucleus	30.3	24.88
PGSC0003DMT400063858	Potato	cytosol	27.88	22.17
CDX99124	Canola	nucleus	25.15	21.96
PGSC0003DMT400057171	Potato	plastid	30.0	21.57
PGSC0003DMT400073788	Potato	nucleus	28.79	15.47
PGSC0003DMT400023236	Potato	cytosol	31.21	14.97
PGSC0003DMT400061014	Potato	mitochondrion	27.88	13.81
PGSC0003DMT400001980	Potato	nucleus, plastid	26.06	13.67
PGSC0003DMT400039936	Potato	plastid	28.18	13.6
PGSC0003DMT400026093	Potato	nucleus, plastid	26.36	13.57
PGSC0003DMT400020760	Potato	plastid	27.88	12.98
PGSC0003DMT400031805	Potato	cytosol	28.48	10.76
PGSC0003DMT400040869	Potato	cytosol	28.18	10.45
PGSC0003DMT400019785	Potato	plastid	1.82	0.89

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1BTU8	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400020454	PGSC:PGSC0003DMG400020454	EnsemblPlants:PGSC0003DMT400052693
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF334
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029678D6
SEG:seg	:	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400020454]

Coordinates

chr6:+:45532257..45533249

Molecular Weight (calculated)

37030.8 Da

IEP (calculated)

8.556

GRAVY (calculated)

-0.226

Length

330 amino acids

Sequence
(BLAST)

001: MAELLWKRGT TLGQGGFGVV SLASTSNALF HGVTLPSLIA VKSCNYSDSQ SLKEEEEFLG MFKHSPCIIR SFGANLSFED EVIIYNLLLE YASGGSLANR
101: LRNCNSLPEF EVKKHTKNVL LGLSCIHTNG IIHCDIKPDN ILLVGTEETA KIADFGLSMT FEQAVKEKQE LMIRGTKRYM APELVLNYDY GPHVDIWALG
201: CTVYELITGI PLWDGDDDHV LHQITFEKPK FQNSKLSKEA KDFLKRCLVK NPSSRWTADV LLNHPFLQNS SIVLVNTAKT RKKKSGSKSL LHKPIRKITF
301: KFGNHKFVRQ LPDLKEVENE TCGRVLGTDK

Best Arabidopsis Sequence Match ( AT3G50310.1 )
(BLAST)

001: MEWVRGETIG FGTFSTVSTA TKSRNSGDFP ALIAVKSTDA YGAASLSNEK SVLDSLGDCP EIIRCYGEDS TVENGEEMHN LLLEYASRGS LASYMKKLGG
101: EGLPESTVRR HTGSVLRGLR HIHAKGFAHC DIKLANILLF NDGSVKIADF GLAMRVDGDL TALRKSVEIR GTPLYMAPEC VNDNEYGSAA DVWALGCAVV
201: EMFSGKTAWS VKEGSHFMSL LIRIGVGDEL PKIPEMLSEE GKDFLSKCFV KDPAKRWTAE MLLNHSFVTI DLEDDHRENF VVKVKDEDKV LMSPKCPFEF
301: DDWDSFTLDS NPSFDSPVER LGSLVSGSIP DWSVGGSWLT VR

Arabidopsis Description

MAPKKK20MKKK20 [Source:UniProtKB/TrEMBL;Acc:A0A178VGW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.