Factsheet for Solyc12g088940.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 3
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039936	Potato	plastid	93.53	92.98
Solyc04g079400.2.1	Tomato	plastid	66.18	62.94
GSMUA_Achr10P...	Banana	mitochondrion	30.59	56.06
VIT_18s0001g11240.t01	Wine grape	cytosol	41.47	54.23
GSMUA_Achr7P08260_001	Banana	cytosol	30.15	53.39
HORVU2Hr1G062700.17	Barley	cytosol	35.59	50.1
GSMUA_Achr4P23230_001	Banana	mitochondrion	37.65	48.3
TraesCS5A01G401400.1	Wheat	cytosol	40.15	42.19
KRH51939	Soybean	mitochondrion, plastid	41.47	42.03
KRH61238	Soybean	cytosol, plastid	40.44	41.98
Solyc02g065110.2.1	Tomato	nucleus, plastid	38.53	41.59
Solyc02g090430.2.1	Tomato	nucleus, plastid	38.97	41.54
GSMUA_Achr7P00640_001	Banana	plastid	42.5	41.4
KRH05734	Soybean	cytosol, plastid	34.41	41.2
EER90833	Sorghum	mitochondrion, plastid	43.97	40.3
GSMUA_Achr2P17150_001	Banana	plastid	43.82	40.05
Zm00001d034152_P002	Maize	plastid	43.97	39.6
TraesCS2A01G264600.1	Wheat	mitochondrion	41.76	38.9
KRH15298	Soybean	cytosol	39.71	38.46
TraesCS2D01G259300.3	Wheat	mitochondrion	41.76	38.38
OQU88348	Sorghum	plastid	42.65	38.36
Zm00001d007965_P002	Maize	mitochondrion	42.21	38.27
Os07t0119000-01	Rice	mitochondrion, plastid	42.06	37.98
Zm00001d013206_P003	Maize	plastid	41.47	37.9
Os03t0764300-01	Rice	mitochondrion, plastid	43.24	37.84
TraesCS2B01G277400.3	Wheat	mitochondrion	41.47	36.67
HORVU5Hr1G097530.9	Barley	mitochondrion, plastid	42.35	36.5
Solyc04g064590.1.1	Tomato	nucleus	16.32	33.23
Solyc07g051860.1.1	Tomato	cytosol	15.44	32.21
Solyc07g051890.1.1	Tomato	cytosol, mitochondrion, plastid	15.0	31.0
Solyc07g051870.1.1	Tomato	mitochondrion	14.85	30.7
Solyc07g051880.1.1	Tomato	plastid	14.71	30.67
Solyc02g064870.1.1	Tomato	cytosol, mitochondrion, nucleus	13.53	30.56
Solyc07g051920.1.1	Tomato	cytosol	14.41	30.43
Solyc02g064930.1.1	Tomato	mitochondrion	13.97	29.87
Solyc11g006000.1.1	Tomato	nucleus	26.62	29.48
Solyc12g017710.1.1	Tomato	cytosol	7.5	28.81
Solyc06g065750.1.1	Tomato	mitochondrion	10.0	28.45
Solyc12g017740.1.1	Tomato	plasma membrane	8.68	28.23
Solyc06g066130.1.1	Tomato	mitochondrion	9.12	27.68
Solyc08g069090.1.1	Tomato	mitochondrion	12.94	27.5
Solyc07g051930.1.1	Tomato	cytosol	14.85	27.3
Solyc01g103240.2.1	Tomato	cytosol	13.82	26.18
Solyc06g065660.1.1	Tomato	cytosol	12.5	26.15
Solyc02g090970.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	13.82	26.11
Solyc12g017760.1.1	Tomato	nucleus, plasma membrane, vacuole	6.18	25.93
Solyc06g065790.1.1	Tomato	mitochondrion	13.53	25.77
Solyc02g064980.1.1	Tomato	cytosol	13.38	25.35
Solyc08g081210.2.1	Tomato	nucleus, plastid	31.18	25.24
Solyc02g064880.1.1	Tomato	mitochondrion	8.38	25.22
Solyc02g090990.1.1	Tomato	cytosol	13.09	25.0
Solyc02g090980.1.1	Tomato	cytosol	12.79	24.51
Solyc03g025360.2.1	Tomato	cytosol	31.91	24.38
Solyc02g064920.1.1	Tomato	mitochondrion	12.21	24.13
Solyc08g069070.1.1	Tomato	mitochondrion	11.18	23.53
Solyc06g036080.2.1	Tomato	cytosol	31.32	23.33
Solyc01g104530.2.1	Tomato	nucleus	22.21	22.71
Solyc07g053170.2.1	Tomato	cytosol	19.85	22.46
Solyc08g076490.2.1	Tomato	cytosol, golgi, nucleus	12.35	22.28
Solyc03g117640.1.1	Tomato	nucleus	12.94	21.73
Solyc01g079750.2.1	Tomato	cytosol	20.74	20.49
Solyc06g068510.1.1	Tomato	nucleus	12.65	20.19
Solyc07g064820.1.1	Tomato	plastid	13.38	18.57
Solyc07g047910.1.1	Tomato	plasma membrane	11.32	15.88
Solyc11g033270.1.1	Tomato	cytosol	18.53	8.99
Solyc01g098980.2.1	Tomato	cytosol	19.71	8.28

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049
GO:GO:0007154	GO:GO:0007165	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147
InterPro:IPR000719	UniProt:K4DGW5	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	PFscan:PS50011
PANTHER:PTHR24361	PANTHER:PTHR24361:SF481	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
EnsemblPlantsGene:Solyc12g088940.1	EnsemblPlants:Solyc12g088940.1.1	UniParc:UPI00027695BF	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:-:64125377..64130154

Molecular Weight (calculated)

74903.0 Da

IEP (calculated)

9.021

GRAVY (calculated)

-0.640

Length

680 amino acids

Sequence
(BLAST)

001: MPFSRKTFSL FLSSSASTSP SHESPKTSGG GGGKRLTRLR KLRHVGDDEI DLQHNDFGSQ SMPVSPDSYK NSGSSGSQST QIKQRCRWSK SVEPHPLPLP
101: EFNSVPKQST SDANLPTRVL QGDASNPAVI RDPSHQTPVE MANPVHKRSS TPTYRRRRFS QDQNSKSVEE NFRLNVPARS APGSGFTSPN LSPIRYSTVD
201: LFHPTFHQAS PPTATSSDRW VGYSAQLLTA RVTQSADHSP LSSPARQNLV NKTLNHQNVA VHSHHKSLPE SPVDWPEGNN VHPLPLPPGV SQQPQLPTTQ
301: NNTDKPDTPY VKGQWQKGKL LGRGTYGSVY EATNRETGAL CAMKEVDLNP DDPKSAECIK QLEQEIRVLR QLKHQNIVQY YGSEIMKDSF CIYLEYVHPG
401: SINKFVRDHG GAMTESIVRN FTRHIVSGLA YLHSTKTIHR DIKGANLLVD ASGIVKLADF GLAKHLSSHA TELSLKGSPH WMAPEVMQAM LRKDANPELA
501: CAIDIWSLGC TVIEMFTGQP PWSGLDGVKA MFSALNKSPP VPETLSSEGK DFLRCCFQRK PADRPTALML LEHPFLSNTN SRENSATVSG SSEDFSRMKL
601: HSPKDMTNHI MELNSSRQTK SPYNGETSHQ SHSVTCDYGA TSHHSPRSTL EILPCISSPE LNPSTFAPAK SSNSIFSPLN

Best Arabidopsis Sequence Match ( AT5G66850.1 )
(BLAST)

001: MRWLPQISFS SPSSSPSSSL KPVASYSESP DPDRNQDRDR FHRRLFRFNR GRLTRQRKLR HLTDDDVLLG ERRASTSSST FDSGLTRSPS AFTAVPRSPS
101: AVPLPLPLPL PEVAGIRNAA NARGLDDRDR DPERLISDRT SSGPPLTSVN GGFARDSRKA TENSSYQDFS PRNRNGYWVN IPTMSAPTSP YMSPVPSPQR
201: KSTGHDLPFF YLPPKSNQAW SAPDMPLDTS GLPPPAFYDI TAFSTDNSPI HSPQPRSPRK QIRSPQPSRP SSPLHSVDSS APPRDSVSSP LHPRLSTDVT
301: NGRRDCCNVH PLPLPPGATC SSSSAASVPS PQAPLKLDSF PMNSQWKKGK LIGRGTFGSV YVASNSETGA LCAMKEVELF PDDPKSAECI KQLEQEIKLL
401: SNLQHPNIVQ YFGSETVEDR FFIYLEYVHP GSINKYIRDH CGTMTESVVR NFTRHILSGL AYLHNKKTVH RDIKGANLLV DASGVVKLAD FGMAKHLTGQ
501: RADLSLKGSP YWMAPELMQA VMQKDSNPDL AFAVDIWSLG CTIIEMFTGK PPWSEFEGAA AMFKVMRDSP PIPESMSPEG KDFLRLCFQR NPAERPTASM
601: LLEHRFLKNS LQPTSPSNSD VSQLFNGMNI TEPSSRREKP NFKLDQVPRA RNMTSSESES GQQQQQQQYR SPDLTGTVNR LSPRSTLEAI PSPCPSQRPK
701: PSSSDRRRTG VTSDHL

Arabidopsis Description

MAPKKK5Mitogen-activated protein kinase kinase kinase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5H5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.