Factsheet for VIT_18s0001g11240.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	mitochondrion	39.04	54.72
GSMUA_Achr7P08260_001	Banana	cytosol	39.42	53.39
HORVU2Hr1G062700.17	Barley	cytosol	48.85	52.59
VIT_00s1194g00010.t01	Wine grape	plastid	48.27	51.75
GSMUA_Achr4P23230_001	Banana	mitochondrion	50.19	49.25
VIT_02s0025g03850.t01	Wine grape	plastid	20.58	43.85
VIT_00s0567g00010.t01	Wine grape	plastid	57.12	42.01
PGSC0003DMT400039936	Potato	plastid	54.81	41.67
Solyc12g088940.1.1	Tomato	plastid	54.23	41.47
PGSC0003DMT400020760	Potato	plastid	55.38	40.62
KRH61238	Soybean	cytosol, plastid	50.96	40.46
Solyc04g079400.2.1	Tomato	plastid	55.38	40.28
KRH05734	Soybean	cytosol, plastid	43.65	39.96
TraesCS5A01G401400.1	Wheat	cytosol	49.42	39.72
KRH51939	Soybean	mitochondrion, plastid	50.77	39.34
GSMUA_Achr2P17150_001	Banana	plastid	54.62	38.17
VIT_12s0142g00700.t01	Wine grape	cytosol	19.04	37.5
GSMUA_Achr7P00640_001	Banana	plastid	49.81	37.11
KRH15298	Soybean	cytosol	49.42	36.61
TraesCS2A01G264600.1	Wheat	mitochondrion	50.38	35.89
EER90833	Sorghum	mitochondrion, plastid	51.15	35.85
TraesCS2D01G259300.3	Wheat	mitochondrion	50.77	35.68
OQU88348	Sorghum	plastid	51.15	35.19
Zm00001d034152_P002	Maize	plastid	50.96	35.1
Zm00001d007965_P002	Maize	mitochondrion	50.58	35.07
Os03t0764300-01	Rice	mitochondrion, plastid	52.12	34.88
Zm00001d013206_P003	Maize	plastid	49.81	34.81
Os07t0119000-01	Rice	mitochondrion, plastid	50.38	34.79
TraesCS2B01G277400.3	Wheat	mitochondrion	50.96	34.46
VIT_12s0034g00750.t01	Wine grape	cytosol	20.58	34.19
HORVU5Hr1G097530.9	Barley	mitochondrion, plastid	49.42	32.57
VIT_12s0034g02540.t01	Wine grape	cytosol	19.23	30.4
VIT_12s0035g01230.t01	Wine grape	nucleus	21.15	30.3
VIT_12s0034g00240.t01	Wine grape	nucleus	22.5	27.73
VIT_07s0031g00530.t01	Wine grape	mitochondrion	19.23	27.1
VIT_04s0044g01290.t01	Wine grape	nucleus	32.31	26.97
VIT_12s0035g00210.t01	Wine grape	cytosol	11.54	24.29
VIT_07s0130g00300.t01	Wine grape	nucleus	17.69	24.02
VIT_10s0116g01230.t01	Wine grape	plastid	17.31	24.0
VIT_16s0050g00770.t01	Wine grape	cytosol	39.62	23.09
VIT_12s0059g00870.t01	Wine grape	plastid	18.27	22.62
VIT_02s0025g03370.t01	Wine grape	cytosol	38.65	22.31
VIT_18s0001g03960.t01	Wine grape	mitochondrion, nucleus	24.23	22.22
VIT_06s0004g06850.t01	Wine grape	cytosol	20.58	21.36
VIT_14s0128g00430.t01	Wine grape	cytosol	25.77	20.0
VIT_05s0020g02910.t01	Wine grape	nucleus	25.96	19.68
VIT_19s0090g00820.t01	Wine grape	plastid	17.69	19.57
VIT_10s0116g01240.t01	Wine grape	plastid	17.5	11.45
VIT_01s0011g02270.t01	Wine grape	cytosol	20.77	7.69

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100257467	wikigene:100257467	MapMan:18.4.2.2	ProteinID:CCB45881	ProteinID:CCB45881.1
UniProt:F6H1E6	EMBL:FN595227	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007154
GO:GO:0007165	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100257467	wikigene:LOC100257467	PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107
PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF481	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	UniParc:UPI00021083B1	ArrayExpress:VIT_18s0001g11240	EnsemblPlantsGene:VIT_18s0001g11240	EnsemblPlants:VIT_18s0001g11240.t01	RefSeq:XP_002282240
RefSeq:XP_002282240.1	:	:	:	:	:

Description

No Description!

Coordinates

chr18:+:9550551..9559415

Molecular Weight (calculated)

57257.5 Da

IEP (calculated)

8.413

GRAVY (calculated)

-0.325

Length

520 amino acids

Sequence
(BLAST)

001: MKLLWCSVYA RGSTWKNTDH LATKSANSPR GFSQDLNDEA CPYNLRVNIP ARSAPTSGFS SPALSPQRFS PGERLPSSYA AIQDFQSPGF DRLPGCSSQM
101: SPLKTPHTPD YSPLHSPTVQ SPCISPCLSP KSPTGIAFSL YPKLLPGSHV TWPEKNGHVT VHPLPLPPIA LMPSELPLPP KALTPSESAI SHHTAEKPNV
201: PSMKSQWQKG KLIGRGTFGS VYVATNRETG ALCAMKEVDI IPDDPKSSEC IKQLEQEIKV LHHLKHPNIV QYYGSEIVDD HFYIYLEYVH PGSINKYVDH
301: FGAMTENVVR NFTRHILSGL AYLHSTKTIH RDIKGANLLV DSFGVVKLAD FGLAKFLTGQ ACDLSLKGSP HWMAPEVMQA VLRKDANPDL AFAVDIWSLG
401: CTIIEMLNGR PPWSEFAAPA AMFKVLHESP PLPETLSSEG KDFLQHCFRR NPAERPSAAM LLDHSFVRSS QDQNVSGFSQ AFSGMQLVDK PRSPGDAMKH
501: KIHSMPLSSG TQTMNRNVLR

Best Arabidopsis Sequence Match ( AT5G66850.1 )
(BLAST)

001: MRWLPQISFS SPSSSPSSSL KPVASYSESP DPDRNQDRDR FHRRLFRFNR GRLTRQRKLR HLTDDDVLLG ERRASTSSST FDSGLTRSPS AFTAVPRSPS
101: AVPLPLPLPL PEVAGIRNAA NARGLDDRDR DPERLISDRT SSGPPLTSVN GGFARDSRKA TENSSYQDFS PRNRNGYWVN IPTMSAPTSP YMSPVPSPQR
201: KSTGHDLPFF YLPPKSNQAW SAPDMPLDTS GLPPPAFYDI TAFSTDNSPI HSPQPRSPRK QIRSPQPSRP SSPLHSVDSS APPRDSVSSP LHPRLSTDVT
301: NGRRDCCNVH PLPLPPGATC SSSSAASVPS PQAPLKLDSF PMNSQWKKGK LIGRGTFGSV YVASNSETGA LCAMKEVELF PDDPKSAECI KQLEQEIKLL
401: SNLQHPNIVQ YFGSETVEDR FFIYLEYVHP GSINKYIRDH CGTMTESVVR NFTRHILSGL AYLHNKKTVH RDIKGANLLV DASGVVKLAD FGMAKHLTGQ
501: RADLSLKGSP YWMAPELMQA VMQKDSNPDL AFAVDIWSLG CTIIEMFTGK PPWSEFEGAA AMFKVMRDSP PIPESMSPEG KDFLRLCFQR NPAERPTASM
601: LLEHRFLKNS LQPTSPSNSD VSQLFNGMNI TEPSSRREKP NFKLDQVPRA RNMTSSESES GQQQQQQQYR SPDLTGTVNR LSPRSTLEAI PSPCPSQRPK
701: PSSSDRRRTG VTSDHL

Arabidopsis Description

MAPKKK5Mitogen-activated protein kinase kinase kinase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5H5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.