Factsheet for VIT_05s0020g02910.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_03s0063g00740.t01
VIT_03s0063g00750.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G06030.1	VIT_03s0063g00740.t01	AT3G48690.1	21798944
AT3G06030.1	VIT_03s0063g00750.t01	AT3G48690.1	21798944
AT3G06030.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT3G06030.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G398000.1	Wheat	cytosol	14.58	71.94
TraesCS3A01G016500.1	Wheat	cytosol	14.29	70.5
VIT_14s0128g00430.t01	Wine grape	cytosol	67.35	68.96
TraesCS6B01G232400.1	Wheat	cytosol	14.43	66.44
PGSC0003DMT400023236	Potato	cytosol	66.03	65.84
GSMUA_Achr2P05360_001	Banana	cytosol, mitochondrion, nucleus	60.2	64.43
KRG96833	Soybean	cytosol	61.08	63.68
KRH68552	Soybean	cytosol	61.08	63.29
AT3G06030.1	Thale cress	cytosol	59.91	63.13
CDY27717	Canola	cytosol	58.16	61.38
Bra020785.1-P	Field mustard	cytosol	58.02	61.04
CDY05223	Canola	cytosol	58.75	60.97
TraesCS5B01G476300.1	Wheat	mitochondrion	15.01	55.38
TraesCS5B01G199400.1	Wheat	cytosol	54.37	54.85
TraesCS5A01G200800.1	Wheat	cytosol	54.37	54.69
TraesCS5D01G206500.1	Wheat	cytosol	54.37	54.69
Zm00001d005696_P001	Maize	cytosol	53.64	54.6
EER98846	Sorghum	nucleus	53.64	54.2
Zm00001d020355_P002	Maize	cytosol	52.92	52.69
HORVU5Hr1G059840.4	Barley	cytosol	46.79	52.11
Os08t0421800-01	Rice	cytosol	50.87	50.58
KXG25169	Sorghum	nucleus	50.58	49.93
Zm00001d050329_P003	Maize	nucleus	50.58	48.4
VIT_12s0142g00700.t01	Wine grape	cytosol	15.6	40.53
VIT_12s0034g00750.t01	Wine grape	cytosol	16.47	36.1
VIT_02s0025g03850.t01	Wine grape	plastid	12.39	34.84
VIT_12s0035g01230.t01	Wine grape	nucleus	17.2	32.51
VIT_12s0034g02540.t01	Wine grape	cytosol	14.58	30.4
VIT_12s0034g00240.t01	Wine grape	nucleus	18.08	29.38
VIT_07s0031g00530.t01	Wine grape	mitochondrion	15.01	27.91
VIT_10s0116g01230.t01	Wine grape	plastid	15.16	27.73
VIT_12s0059g00870.t01	Wine grape	plastid	16.33	26.67
VIT_00s1194g00010.t01	Wine grape	plastid	18.66	26.39
VIT_18s0001g11240.t01	Wine grape	cytosol	19.68	25.96
VIT_04s0044g01290.t01	Wine grape	nucleus	23.18	25.52
VIT_12s0035g00210.t01	Wine grape	cytosol	9.18	25.51
Solyc01g098980.2.1	Tomato	cytosol	60.06	25.46
VIT_07s0130g00300.t01	Wine grape	nucleus	13.7	24.54
VIT_19s0090g00820.t01	Wine grape	plastid	16.76	24.47
VIT_18s0001g03960.t01	Wine grape	mitochondrion, nucleus	19.97	24.16
VIT_00s0567g00010.t01	Wine grape	plastid	21.43	20.79
VIT_06s0004g06850.t01	Wine grape	cytosol	15.01	20.56
VIT_16s0050g00770.t01	Wine grape	cytosol	25.36	19.51
VIT_02s0025g03370.t01	Wine grape	cytosol	25.36	19.31
VIT_01s0011g02270.t01	Wine grape	cytosol	28.43	13.88
VIT_10s0116g01240.t01	Wine grape	plastid	16.04	13.84

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100232947	wikigene:100232947	MapMan:13.4.4.1.2	MapMan:18.4.2.2	ProteinID:AAS19278
ProteinID:AAS19278.1	EMBL:AM465358	EMBL:AY461710	ProteinID:CAN68114	ProteinID:CAN68114.1	ProteinID:CBI26208
ProteinID:CBI26208.3	ncoils:Coil	UniProt:D7T6T7	EMBL:FN595749	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950
GO:GO:0007049	GO:GO:0007154	GO:GO:0007165	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014
GO:GO:0031098	GO:GO:0032147	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:MAP3K	wikigene:MAP3K
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF628
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC53051
UniParc:UPI00019831BE	ArrayExpress:VIT_05s0020g02910	EnsemblPlantsGene:VIT_05s0020g02910	EnsemblPlants:VIT_05s0020g02910.t01	unigene:Vvi.5211	SEG:seg

Description

No Description!

Coordinates

chr5:+:4619268..4633136

Molecular Weight (calculated)

75822.1 Da

IEP (calculated)

7.179

GRAVY (calculated)

-0.494

Length

686 amino acids

Sequence
(BLAST)

001: MQDIFGSVRR SLVFRPASGE DGEYGGYGGP VEKIWSSIRK SGIGLFSRQS VRALPPIPKD EAPSIRWRKG ELIGCGAFGR VYMGMNLDSG ELLAIKQVSI
101: AANSASKEKT QAHIRELEEE VKLLKNLSHP NIVRYLGTAR EDESLNILLE FVPGGSISSL LGKFGSFPES VIRMYTKQLL LGLEYLHKNG IMHRDIKGAN
201: ILVDNKGCIK LADFGASKKV VELATMTGAK SMKGTPYWMA PEVILQTGHS FSADIWSVGC TVIEMATGKP PWSQQYQEVA ALFHIGTTKS HPPIPEHLTA
301: EAKDFLLKCL QKEPNLRPAA SELLQHPFVS GEYQEPHPVF QTSVMENSGN MMATSETDLK SFPNPVIRRS NCTSSNNVCN MGSVRCSTVY PEKFSGTGPL
401: WGANSCDDDM CQIDDKDDFI VHQSVKFGSA ILSDHLNKSF NPMCEPTDDW PCKFDESPEL TKSGANLSSH QTISKPAGSP RASNERENDF TFPCGPLVGD
501: DDDEVTESKI RAFLDEKALD LKKLQTPLYE EFYNSTLNAA GPPSAVGKSH DNVTNFLNLP PKSRSPNQTP TRRLSAAVDA ACISNSANHT KRGLNVGTIS
601: DRTLKEIQSP QLSEWKELLL DAQQEPVSLS TNFSERRRKW KEELDQELEK KRELLRQAGV GGKTASPKDQ ILNRPRERLR FAFPGK

Best Arabidopsis Sequence Match ( AT3G06030.1 )
(BLAST)

001: MQDILGSVRR SLVFRSSLAG DDGTSGGGLS GFVGKINSSI RSSRIGLFSK PPPGLPAPRK EEAPSIRWRK GELIGCGAFG RVYMGMNLDS GELLAIKQVL
101: IAPSSASKEK TQGHIRELEE EVQLLKNLSH PNIVRYLGTV RESDSLNILM EFVPGGSISS LLEKFGSFPE PVIIMYTKQL LLGLEYLHNN GIMHRDIKGA
201: NILVDNKGCI RLADFGASKK VVELATVNGA KSMKGTPYWM APEVILQTGH SFSADIWSVG CTVIEMATGK PPWSEQYQQF AAVLHIGRTK AHPPIPEDLS
301: PEAKDFLMKC LHKEPSLRLS ATELLQHPFV TGKRQEPYPA YRNSLTECGN PITTQGMNVR SSINSLIRRS TCSGLKDVCE LGSLRSSIIY PQKSNNSGFG
401: WRDGDSDDLC QTDMDDLCNI ESVRNNVLSQ STDLNKSFNP MCDSTDNWSC KFDESPKVMK SKSNLLSYQA SQLQTGVPCD EETSLTFAGG SSVAEDDYKG
501: TELKIKSFLD EKAQDLKRLQ TPLLEEFHNA MNPGIPQGAL GDTNIYNLPN LPSISKTPKR LPSRRLSAIS DAMPSPLKSS KRTLNTSRVM QSGTEPTQVN
601: ESTKKGVNNS RCFSEIRRKW EEELYEELER HRENLRHAGA GGKTPLSGHK G

Arabidopsis Description

ANP3Mitogen-activated protein kinase kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:O22042]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.