Factsheet for VIT_12s0035g00210.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0034g02540.t01	Wine grape	cytosol	30.77	23.1
VIT_07s0031g00530.t01	Wine grape	mitochondrion	30.36	20.33
VIT_10s0116g01230.t01	Wine grape	plastid	29.96	19.73
VIT_12s0035g01230.t01	Wine grape	nucleus	26.72	18.18
VIT_12s0142g00700.t01	Wine grape	cytosol	19.43	18.18
VIT_12s0059g00870.t01	Wine grape	plastid	30.77	18.1
VIT_12s0034g00750.t01	Wine grape	cytosol	22.67	17.89
VIT_07s0130g00300.t01	Wine grape	nucleus	26.32	16.97
VIT_19s0090g00820.t01	Wine grape	plastid	31.17	16.38
VIT_06s0004g06850.t01	Wine grape	cytosol	28.74	14.17
VIT_12s0034g00240.t01	Wine grape	nucleus	21.46	12.56
VIT_18s0001g11240.t01	Wine grape	cytosol	24.29	11.54
VIT_00s1194g00010.t01	Wine grape	plastid	21.86	11.13
VIT_04s0044g01290.t01	Wine grape	nucleus	26.32	10.43
VIT_18s0001g03960.t01	Wine grape	mitochondrion, nucleus	22.27	9.7
VIT_14s0128g00430.t01	Wine grape	cytosol	25.51	9.4
VIT_05s0020g02910.t01	Wine grape	nucleus	25.51	9.18
VIT_10s0116g01240.t01	Wine grape	plastid	29.55	9.18
VIT_00s0567g00010.t01	Wine grape	plastid	25.91	9.05
CDY23615	Canola	cytosol	4.05	7.58
VIT_02s0025g03370.t01	Wine grape	cytosol	27.53	7.55
VIT_16s0050g00770.t01	Wine grape	cytosol	26.72	7.4
VIT_02s0025g03850.t01	Wine grape	plastid	6.48	6.56
VIT_01s0011g02270.t01	Wine grape	cytosol	27.13	4.77

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	ProteinID:CBI29770	ProteinID:CBI29770.3	UniProt:D7TGZ8	EMBL:FN595990
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007154	GO:GO:0007165	GO:GO:0007346
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF403
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0001BE3877
ArrayExpress:VIT_12s0035g00210	EnsemblPlantsGene:VIT_12s0035g00210	EnsemblPlants:VIT_12s0035g00210.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:-:19452793..19453536

Molecular Weight (calculated)

28550.0 Da

IEP (calculated)

7.480

GRAVY (calculated)

0.060

Length

247 amino acids

Sequence
(BLAST)

001: MHERGLTHCD LKPDNVLVFP GKDGGNVVKI ADFGMARRDG EQEVLEVRFR GTPAYMSPES LAFEEYEAPM DVWSLGCTVV ELVTGQRPWN RCKGVNEIVE
101: HVVVKSEVPN IPKYLSESGK DFLVRCFERD PRRRWAAEKL MNHSFVAPIP TQMVMNDLPS SRCCHPHRPQ ACLLWWSVLV LHRFQLLVWF LLHGIPFLPG
201: CILFLQCFQI FHFLPDAVRL RLISRSLLIV HCFRVILFLL YGSDFDQ

Best Arabidopsis Sequence Match ( AT5G67080.1 )
(BLAST)

001: MEWIRGETIG YGTFSTVSLA TRSNNDSGEF PPLMAVKSAD SYGAASLANE KSVLDNLGDD CNEIVRCFGE DRTVENGEEM HNLFLEYASR GSLESYLKKL
101: AGEGVPESTV RRHTGSVLRG LRHIHANGFA HCDLKLGNIL LFGDGAVKIA DFGLAKRIGD LTALNYGVQI RGTPLYMAPE SVNDNEYGSE GDVWALGCVV
201: VEMFSGKTAW SLKEGSNFMS LLLRIGVGDE VPMIPEELSE QGRDFLSKCF VKDPKKRWTA EMLLNHPFVT VDVDHDVLVK EEDFVVNMKT EDVSTSPRCP
301: FEFPDWVSVS SGSQTIDSPD ERVASLVTDM IPDWSVTNSW VTVR

Arabidopsis Description

MAPKKK19Mitogen-activated protein kinase kinase kinase 19 [Source:UniProtKB/TrEMBL;Acc:Q9FHA5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.