Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_02s0025g01280.t01 | |
| VIT_15s0046g02010.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G08480.1 | VIT_15s0046g02010.t01 | AT4G01370.1 | 22643122 |
| AT4G08500.1 | VIT_02s0025g01280.t01 | AT4G23810.1 | 17587183 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_12s0034g00750.t01 | Wine grape | cytosol | 66.67 | 56.23 |
| PGSC0003DMT400067237 | Potato | cytosol | 60.23 | 54.64 |
| Bra039693.1-P | Field mustard | cytosol | 56.06 | 54.01 |
| CDY18020 | Canola | cytosol | 15.15 | 51.28 |
| VIT_12s0034g00240.t01 | Wine grape | nucleus | 71.59 | 44.79 |
| CDY36607 | Canola | cytosol | 54.55 | 43.77 |
| CDY24072 | Canola | cytosol | 57.2 | 42.42 |
| OQU91136 | Sorghum | cytosol | 58.33 | 41.51 |
| TraesCS6A01G327500.1 | Wheat | mitochondrion | 55.3 | 34.93 |
| VIT_18s0001g03960.t01 | Wine grape | mitochondrion, nucleus | 65.15 | 30.34 |
| GSMUA_Achr10P... | Banana | cytosol | 59.09 | 29.71 |
| KRH53173 | Soybean | nucleus | 62.12 | 29.55 |
| KRH64744 | Soybean | nucleus | 62.5 | 29.15 |
| Bra000647.1-P | Field mustard | cytosol | 59.47 | 29.02 |
| KRH16614 | Soybean | mitochondrion | 60.61 | 28.93 |
| GSMUA_Achr11P... | Banana | cytosol | 59.47 | 28.81 |
| CDY69517 | Canola | cytosol | 59.47 | 28.6 |
| CDY34000 | Canola | cytosol | 59.47 | 28.55 |
| TraesCS6B01G358800.1 | Wheat | cytosol | 56.44 | 28.49 |
| OQU85800 | Sorghum | mitochondrion | 55.68 | 28.32 |
| Zm00001d052147_P001 | Maize | cytosol | 56.06 | 28.19 |
| GSMUA_Achr7P11850_001 | Banana | mitochondrion, nucleus | 59.09 | 28.16 |
| TraesCS6D01G307100.1 | Wheat | cytosol | 55.68 | 28.11 |
| HORVU6Hr1G079810.1 | Barley | mitochondrion | 56.06 | 28.03 |
| Solyc07g053170.2.1 | Tomato | cytosol | 63.64 | 27.95 |
| KRH16616 | Soybean | nucleus | 61.74 | 27.63 |
| CDY36198 | Canola | cytosol | 58.33 | 26.78 |
| GSMUA_Achr10P... | Banana | cytosol | 57.2 | 26.73 |
| GSMUA_Achr1P12210_001 | Banana | mitochondrion | 58.33 | 26.64 |
| KRH18819 | Soybean | nucleus | 59.85 | 26.6 |
| GSMUA_Achr2P07690_001 | Banana | nucleus | 57.95 | 26.38 |
| AT4G08500.1 | Thale cress | cytosol, mitochondrion | 60.61 | 26.32 |
| Bra037860.1-P | Field mustard | cytosol | 58.33 | 25.71 |
| CDX75154 | Canola | cytosol | 58.71 | 25.62 |
| TraesCS4B01G216700.1 | Wheat | cytosol, plastid | 56.82 | 25.38 |
| VIT_12s0035g01230.t01 | Wine grape | nucleus | 34.85 | 25.34 |
| TraesCS4D01G217000.1 | Wheat | plastid | 56.82 | 25.34 |
| VIT_12s0034g02540.t01 | Wine grape | cytosol | 31.44 | 25.23 |
| Zm00001d033655_P003 | Maize | nucleus, plastid | 57.95 | 25.16 |
| TraesCS4A01G087700.1 | Wheat | cytosol, plastid | 56.82 | 25.04 |
| AT4G08470.1 | Thale cress | cytosol | 53.03 | 25.0 |
| Zm00001d013477_P008 | Maize | plastid | 57.58 | 24.8 |
| Os03t0262200-00 | Rice | cytosol, plastid | 56.06 | 24.79 |
| EER92515 | Sorghum | cytosol, plastid | 56.44 | 24.67 |
| Os03t0703400-01 | Rice | plasma membrane | 59.09 | 23.85 |
| VIT_02s0025g03850.t01 | Wine grape | plastid | 21.97 | 23.77 |
| TraesCS4D01G038900.1 | Wheat | plastid | 57.58 | 23.68 |
| Zm00001d028514_P002 | Maize | plastid | 57.58 | 23.28 |
| HORVU4Hr1G006660.1 | Barley | plastid | 57.95 | 23.11 |
| TraesCS4A01G272500.1 | Wheat | plastid | 57.58 | 23.03 |
| TraesCS4B01G041600.1 | Wheat | plastid | 57.58 | 22.82 |
| VIT_07s0031g00530.t01 | Wine grape | mitochondrion | 31.82 | 22.76 |
| KXG20217 | Sorghum | cytosol | 55.3 | 22.36 |
| VIT_10s0116g01230.t01 | Wine grape | plastid | 31.44 | 22.13 |
| Zm00001d047875_P003 | Maize | plastid | 53.03 | 21.77 |
| HORVU4Hr1G061550.1 | Barley | cytosol, plastid | 56.44 | 21.56 |
| VIT_12s0059g00870.t01 | Wine grape | plastid | 33.71 | 21.19 |
| VIT_19s0090g00820.t01 | Wine grape | plastid | 35.23 | 19.79 |
| VIT_00s1194g00010.t01 | Wine grape | plastid | 35.98 | 19.59 |
| VIT_04s0044g01290.t01 | Wine grape | nucleus | 46.21 | 19.58 |
| VIT_12s0035g00210.t01 | Wine grape | cytosol | 18.18 | 19.43 |
| AT4G08480.1 | Thale cress | cytosol, plastid | 56.82 | 19.4 |
| VIT_07s0130g00300.t01 | Wine grape | nucleus | 28.03 | 19.32 |
| VIT_18s0001g11240.t01 | Wine grape | cytosol | 37.5 | 19.04 |
| VIT_06s0004g06850.t01 | Wine grape | cytosol | 32.95 | 17.37 |
| VIT_14s0128g00430.t01 | Wine grape | cytosol | 40.91 | 16.12 |
| VIT_05s0020g02910.t01 | Wine grape | nucleus | 40.53 | 15.6 |
| CDY18021 | Canola | nucleus | 23.86 | 15.37 |
| VIT_00s0567g00010.t01 | Wine grape | plastid | 40.53 | 15.13 |
| VIT_02s0025g03370.t01 | Wine grape | cytosol | 47.73 | 13.98 |
| VIT_16s0050g00770.t01 | Wine grape | cytosol | 46.59 | 13.79 |
| VIT_10s0116g01240.t01 | Wine grape | plastid | 31.06 | 10.31 |
| VIT_01s0011g02270.t01 | Wine grape | cytosol | 37.88 | 7.12 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:100853186 | wikigene:100853186 | MapMan:18.4.2.2 | ProteinID:CCB57236 | ProteinID:CCB57236.1 |
| UniProt:F6HRC8 | EMBL:FN596011 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0006950 | GO:GO:0007049 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007346 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0023014 | GO:GO:0031098 | GO:GO:0032147 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | EntrezGene:LOC100853186 | wikigene:LOC100853186 | PFAM:PF00069 | PIRSF:PIRSF000654 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR24361 | PANTHER:PTHR24361:SF409 | InterPro:Prot_kinase_dom | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | UniParc:UPI0002108B66 | ArrayExpress:VIT_12s0142g00700 | EnsemblPlantsGene:VIT_12s0142g00700 | EnsemblPlants:VIT_12s0142g00700.t01 | RefSeq:XP_003634867 |
| RefSeq:XP_003634867.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr12_random:+:615727..641062
Molecular Weight (calculated)
30103.2 Da
IEP (calculated)
7.046
GRAVY (calculated)
-0.175
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MESNCTSDRI IFVVKEASLL DQGSQGKQSI YQLEQEISLL SQFEHENIVR YYGTNKDETK LCIFLELAPE GSLLNLYRKH KLLEPQVSEY TRQILNGLSY
101: LHGKHVIHRD VKCANILVFE NHIVKLADFG LSKVSFISRV TISFKGSPFW TAPEVVNAVY RKNDCYGLAA DIWSLGCTVL EMLTQQHPYP QYEWMQALFR
201: IGHGELPFVP DSLSIDARDF ILKCLQVNPS DWPTARQLLD HPFVKSPLHP FIGPASPRAN GIRP
101: LHGKHVIHRD VKCANILVFE NHIVKLADFG LSKVSFISRV TISFKGSPFW TAPEVVNAVY RKNDCYGLAA DIWSLGCTVL EMLTQQHPYP QYEWMQALFR
201: IGHGELPFVP DSLSIDARDF ILKCLQVNPS DWPTARQLLD HPFVKSPLHP FIGPASPRAN GIRP
001: MDRILARMKK STGRRGGDKN ITPVRRLERR DAARNINYDA ASCSSSSAED LSVSTSSLMT RSLEFPEPTS FRIGGGVGEM DRIYRSLGVS GPDDLAISFD
101: AWEACKKRSS SDVVNRFKSF DLDKVRDQDL SEEGPSGVVV GSDSMNHKVQ GQDLSEAGPS GGIVTELSEI GNLITPVDRL VADGVVENRR VMERTPTIVK
201: SKGYLVPNNV VAVGVGVGGG IKGLRPPVLK PPPAMKRPPI DHRGSSWDFL THFAPSETVK RPSSSSSSSE DGCDEEEGKE EEAEAEEMGA RFIQLGDTAD
301: ETCSFTTNEG DSSSTVSNTS PIYPDGGAII TSWQKGQLLG RGSFGSVYEG ISGDGDFFAV KEVSLLDQGS QAQECIQQLE GEIKLLSQLQ HQNIVRYRGT
401: AKDGSNLYIF LELVTQGSLL KLYQRYQLRD SVVSLYTRQI LDGLKYLHDK GFIHRDIKCA NILVDANGAV KLADFGLAKV SKFNDIKSCK GTPFWMAPEV
501: INRKDSDGYG SPADIWSLGC TVLEMCTGQI PYSDLEPVQA LFRIGRGTLP EVPDTLSLDA RLFILKCLKV NPEERPTAAE LLNHPFVRRP LPSVGSGGSG
601: SASPLLRR
101: AWEACKKRSS SDVVNRFKSF DLDKVRDQDL SEEGPSGVVV GSDSMNHKVQ GQDLSEAGPS GGIVTELSEI GNLITPVDRL VADGVVENRR VMERTPTIVK
201: SKGYLVPNNV VAVGVGVGGG IKGLRPPVLK PPPAMKRPPI DHRGSSWDFL THFAPSETVK RPSSSSSSSE DGCDEEEGKE EEAEAEEMGA RFIQLGDTAD
301: ETCSFTTNEG DSSSTVSNTS PIYPDGGAII TSWQKGQLLG RGSFGSVYEG ISGDGDFFAV KEVSLLDQGS QAQECIQQLE GEIKLLSQLQ HQNIVRYRGT
401: AKDGSNLYIF LELVTQGSLL KLYQRYQLRD SVVSLYTRQI LDGLKYLHDK GFIHRDIKCA NILVDANGAV KLADFGLAKV SKFNDIKSCK GTPFWMAPEV
501: INRKDSDGYG SPADIWSLGC TVLEMCTGQI PYSDLEPVQA LFRIGRGTLP EVPDTLSLDA RLFILKCLKV NPEERPTAAE LLNHPFVRRP LPSVGSGGSG
601: SASPLLRR
Arabidopsis Description
MEKK1Mitogen-activated protein kinase kinase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39008]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.