Factsheet for VIT_15s0046g02010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0527g00020.t01	nucleus
VIT_02s0012g01280.t01
VIT_08s0058g00690.t01
VIT_11s0016g01770.t01
VIT_11s0016g02970.t01
VIT_12s0034g00240.t01
VIT_12s0034g00750.t01
VIT_12s0142g00700.t01
VIT_15s0046g02010.t01
VIT_18s0001g06350.t01
VIT_19s0014g02490.t01	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01370.1	VIT_00s0527g00020.t01	AT1G28280.1	24750137
AT4G01370.1	VIT_18s0001g06350.t01	AT1G78310.1	24750137
AT4G01370.1	VIT_02s0012g01280.t01	AT2G35230.1	24750137
AT4G01370.1	VIT_08s0058g00690.t01	AT2G38470.1	18650934
AT4G01370.1	VIT_15s0046g02010.t01	AT4G01370.1	19513235
AT4G01370.1	VIT_12s0034g00240.t01	AT4G08480.1	22643122
AT4G01370.1	VIT_12s0034g00750.t01	AT4G08480.1	22643122
AT4G01370.1	VIT_12s0142g00700.t01	AT4G08480.1	22643122
AT4G01370.1	VIT_11s0016g01770.t01	AT4G29810.2	23115249
AT4G01370.1	VIT_19s0014g02490.t01	AT5G53830.1	24750137
AT4G01370.1	VIT_11s0016g02970.t01	AT5G56580.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00834	Soybean	cytosol	90.13	90.62
KRH40392	Soybean	cytosol	89.07	89.54
KRH06592	Soybean	cytosol	88.27	88.74
KRH48074	Soybean	cytosol, nucleus	88.27	88.74
PGSC0003DMT400000192	Potato	cytosol	87.73	88.2
Solyc01g094960.2.1	Tomato	cytosol, nucleus	87.73	88.2
AT4G01370.1	Thale cress	cytosol	87.47	87.23
VIT_02s0025g00270.t01	Wine grape	cytosol	86.93	86.93
Bra000955.1-P	Field mustard	cytosol	86.13	86.6
CDX74352	Canola	cytosol	86.13	86.6
CDX91889	Canola	cytosol	86.13	86.6
AT1G01560.2	Thale cress	cytosol	84.8	86.18
Os10t0533600-01	Rice	plasma membrane	84.0	83.78
EER94589	Sorghum	cytosol	82.93	82.49
Zm00001d047349_P001	Maize	extracellular	81.33	81.99
TraesCS1B01G192600.3	Wheat	cytosol	81.6	81.38
TraesCS1D01G192200.1	Wheat	cytosol	81.6	81.38
TraesCS1A01G184500.1	Wheat	cytosol	81.6	81.17
HORVU1Hr1G049500.2	Barley	cytosol	81.6	81.17
VIT_06s0004g03620.t01	Wine grape	cytosol	77.6	78.44
VIT_06s0004g03540.t01	Wine grape	cytosol	65.87	65.87
VIT_05s0094g00900.t01	Wine grape	cytosol	69.87	65.83
VIT_18s0001g13010.t01	Wine grape	cytosol	54.67	54.52
VIT_04s0023g02420.t01	Wine grape	cytosol, nucleus, peroxisome	52.53	53.53
VIT_05s0020g02530.t01	Wine grape	cytosol	42.93	28.6
VIT_19s0014g00220.t01	Wine grape	cytosol	45.07	28.26
VIT_12s0142g00130.t01	Wine grape	cytosol	45.07	27.7
VIT_17s0000g02570.t01	Wine grape	mitochondrion	44.0	27.45
VIT_01s0011g04920.t01	Wine grape	cytosol	43.47	26.59

Protein Annotations

KEGG:04150+2.7.11.24	Gene3D:1.10.510.10	EntrezGene:100852927	wikigene:100852927	MapMan:13.4.4.1.4	MapMan:18.4.3.6
Gene3D:3.30.200.20	UniProt:A5AD40	EMBL:AM423527	ProteinID:CAN75543	ProteinID:CAN75543.1	ProteinID:CBI40425
ProteinID:CBI40425.3	EMBL:FN596755	GO:GO:0000165	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004707	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010468	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100852927	wikigene:LOC100852927	InterPro:MAP_kinase_CS	PFAM:PF00069	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	ScanProsite:PS01351	PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF227
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC55524
UniParc:UPI000151E4E4	ArrayExpress:VIT_15s0046g02010	EnsemblPlantsGene:VIT_15s0046g02010	EnsemblPlants:VIT_15s0046g02010.t01	unigene:Vvi.3146	RefSeq:XP_003633959
RefSeq:XP_003633959.1	:	:	:	:	:

Description

Mitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:A5AD40]

Coordinates

chr15:-:18821588..18826743

Molecular Weight (calculated)

43274.9 Da

IEP (calculated)

6.903

GRAVY (calculated)

-0.385

Length

375 amino acids

Sequence
(BLAST)

001: MSMESSAGSV EGNIRGVSTH GGRYVQYNVY GNLFEVSRKY VPPIRPVGRG AYGIVCAAMN SETREEVAIK KIGNAFDNRI DAKRTLREIK LLRHMDHENV
101: IVLKDIIRPP KRENFNDVYI VYELMDTDLH QIIRSNQPLN DDHCRYFLYQ VLRGLKYVHS ANVLHRDLKP SNLLLNANCD LKIGDFGLAR TTSETDFMTE
201: YVVTRWYRAP ELLLNCSEYT AAIDIWSVGC ILGEIMTRQP LFPGRDYVHQ LRLITELIGS PDDSSLGFLR SDNARRYVRQ LPQYPRQQFQ ARFPNMSPGA
301: IDLLEKMLVF DPNRRITVEG ALSHPYLAPL HDINEEPVCP RPFVFDFEQP SFTEENIKEL IWRESVKFNP DPPVH

Best Arabidopsis Sequence Match ( AT4G01370.1 )
(BLAST)

001: MSAESCFGSS GDQSSSKGVA THGGSYVQYN VYGNLFEVSR KYVPPLRPIG RGAYGIVCAA TNSETGEEVA IKKIGNAFDN IIDAKRTLRE IKLLKHMDHE
101: NVIAVKDIIK PPQRENFNDV YIVYELMDTD LHQIIRSNQP LTDDHCRFFL YQLLRGLKYV HSANVLHRDL KPSNLLLNAN CDLKLGDFGL ARTKSETDFM
201: TEYVVTRWYR APELLLNCSE YTAAIDIWSV GCILGETMTR EPLFPGKDYV HQLRLITELI GSPDDSSLGF LRSDNARRYV RQLPQYPRQN FAARFPNMSA
301: GAVDLLEKML VFDPSRRITV DEALCHPYLA PLHDINEEPV CVRPFNFDFE QPTLTEENIK ELIYRETVKF NPQDSV

Arabidopsis Description

MPK4Mitogen-activated protein kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q39024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.