Factsheet for VIT_12s0142g00130.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_12s0142g00130.t01
VIT_17s0000g01970.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42880.1	VIT_17s0000g01970.t01	AT1G73500.1	19513235
AT2G42880.1	VIT_12s0142g00130.t01	AT2G42880.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G342800.3	Wheat	cytosol	55.9	81.0
TraesCS7B01G246900.3	Wheat	cytosol	55.9	81.0
KRH46057	Soybean	cytosol	81.64	80.98
KRG98916	Soybean	cytosol	81.48	80.94
TraesCS7A01G335300.2	Wheat	cytosol	55.74	80.76
HORVU7Hr1G082510.4	Barley	cytosol	55.74	80.76
GSMUA_Achr6P27100_001	Banana	cytosol	79.18	79.31
GSMUA_Achr9P06770_001	Banana	cytosol	75.74	78.71
AT2G42880.1	Thale cress	cytosol	75.25	75.74
KXG32937	Sorghum	cytosol	74.75	74.39
Os01t0629900-01	Rice	cytosol	74.1	73.98
Bra004727.1-P	Field mustard	cytosol	64.26	73.96
CDX79842	Canola	cytosol	74.75	73.91
TraesCS3B01G256700.1	Wheat	cytosol	71.97	72.92
TraesCS3A01G228000.1	Wheat	cytosol	72.79	72.43
TraesCS3D01G225600.1	Wheat	cytosol	72.62	72.27
HORVU3Hr1G056200.1	Barley	cytosol	72.46	71.99
VIT_19s0014g00220.t01	Wine grape	cytosol	70.49	71.91
CDY42817	Canola	cytosol	73.93	70.25
Bra000277.1-P	Field mustard	cytosol	73.77	69.77
CDX83515	Canola	cytosol	73.77	69.77
CDY60195	Canola	cytosol	74.43	69.1
Zm00001d011426_P002	Maize	cytosol	74.59	68.73
GSMUA_AchrUn_...	Banana	nucleus	68.69	67.15
VIT_05s0020g02530.t01	Wine grape	cytosol	61.8	66.96
Os06t0367900-01	Rice	cytosol	60.98	65.26
VIT_17s0000g02570.t01	Wine grape	mitochondrion	56.07	56.91
VIT_01s0011g04920.t01	Wine grape	cytosol	55.41	55.14
VIT_02s0025g00270.t01	Wine grape	cytosol	28.52	46.4
VIT_06s0004g03620.t01	Wine grape	cytosol	28.03	46.09
VIT_06s0004g03540.t01	Wine grape	cytosol	28.03	45.6
VIT_15s0046g02010.t01	Wine grape	cytosol	27.7	45.07
VIT_04s0023g02420.t01	Wine grape	cytosol, nucleus, peroxisome	26.56	44.02
VIT_05s0094g00900.t01	Wine grape	cytosol	28.69	43.97
VIT_18s0001g13010.t01	Wine grape	cytosol	26.89	43.62

Protein Annotations

KEGG:04150+2.7.11.24	Gene3D:1.10.510.10	EntrezGene:100252272	wikigene:100252272	MapMan:18.4.3.6	Gene3D:3.30.200.20
EMBL:AM473234	ProteinID:CAN81544	ProteinID:CAN81544.1	ProteinID:CCB56396	ProteinID:CCB56396.1	UniProt:F6HNZ0
EMBL:FN595999	GO:GO:0000165	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004707	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010468
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100252272	wikigene:LOC100252272	InterPro:MAP_kinase_CS	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS01351
PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF195	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	UniParc:UPI00015CA174	ArrayExpress:VIT_12s0142g00130	EnsemblPlantsGene:VIT_12s0142g00130	EnsemblPlants:VIT_12s0142g00130.t01	unigene:Vvi.17082
unigene:Vvi.25342	RefSeq:XP_002283794	RefSeq:XP_002283794.2	RefSeq:XP_010656934.1	SEG:seg	:

Description

Mitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:F6HNZ0]

Coordinates

chr12:+:126317..133214

Molecular Weight (calculated)

68952.1 Da

IEP (calculated)

9.334

GRAVY (calculated)

-0.334

Length

610 amino acids

Sequence
(BLAST)

001: MDFFSEYGDA NRYKIQEVVG KGSYGVVCSA VDTLTGEKVA IKKIHDIFEH ISDAARILRE IKLLRLLRHP DIVEIKHIML PPSRRDFKDI YVVFELMESD
101: LHQVIKANDD LTREHYQFFL YQLLRALKYI HTANVYHRDL KPKNILANAN CKLKICDFGL ARVAFSDTPT TIFWTDYVAT RWYRAPELCG SFFSKYTPAI
201: DIWSIGCIFA EVLTGKPLFP GKNVVHQLDL MTDLLGTPSL DTISRVRNEK ARRYLTSMRK KQPVIFAQKF PNADPLALRL LERLLAFDPK DRPTAEEALA
301: DPYFKGLAKV EREPSCQPIT KMEFEFERRR VTKEDIRELI FREILEYHPQ LLKDYVNGTE RTNFLYPSAV DQFRKQFAHL EENSGKTGPV IPLERKHVSL
401: PRSTVVHSNT IPAKEPHIIA FKDRQIAEES CSRSSRDTDG IPGNLSRSLQ ASQRIPMAKP GKVVGPLAPP ENGSAIKDAY DHRTLIRNAV LPSQALPPAY
501: CYRRTSAGKQ ERCVGEAERD LSSQAKQVPQ CGMTAKLAPD IAINIDTNPF YMTRAGVTKV DHVDDRITID ANLLQAKAQF GGIGAAAAAA ATAAAHRKVG
601: TVQFGMSRMY

Best Arabidopsis Sequence Match ( AT2G42880.1 )
(BLAST)

001: MQQDNRKKNN LEMEFFSDYG DANRFKVQEV IGKGSYGVVC SAIDTLTGEK VAIKKIHDIF EHISDAARIL REIKLLRLLR HPDIVEIKHI MLPPSRREFK
101: DIYVVFELME SDLHQVIKAN DDLTREHYQF FLYQLLRALK YIHTANVYHR DLKPKNILAN ANCKLKICDF GLARVAFNDT PTTIFWTDYV ATRWYRAPEL
201: CGSFYSKYTP AIDIWSIGCI FAEVLMGKPL FPGKNVVHQL DLMTDLLGTP SLDTISRVRN EKARRYLTSM RKKPPIPFAQ KFPNADPLSL KLLERLLAFD
301: PKDRPTAEEA LADPYFKGLA KVEREPSCQP ITKMEFEFER RKVTKEDIRE LISREILEYH PQLLKDHMNG ADKASFLYPS AVDQFRRQFA HLEENSGKTG
401: PVAPLERKHA SLPRSTVIHS TAVARGGQPK LMNNTNTLNP ETTQNIPFNH ATIQAQQRNL SAAKPSTFMG PVAPFDNGRI SRDAYDPRSF IRSTNLPFSQ
501: QSAATVAMGK QQERRTTMEP EKQARQISQY NRYAPDVAIN IDNNPFIMAR TGMNKAENIS DRIIIDTNLL QATAGIGVAA AAAAAAPGGS AHRKVGAVRY
601: GMSKMY

Arabidopsis Description

MPK20Mitogen-activated protein kinase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJG9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.