CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX68224
CDX79842
CDX82067
CDX83515
CDY11103
CDY42817
CDY60195
CDY71921

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42880.1	CDX68224	AT1G73500.1	19513235
AT2G42880.1	CDX82067	AT1G73500.1	19513235
AT2G42880.1	CDY11103	AT1G73500.1	19513235
AT2G42880.1	CDY71921	AT1G73500.1	19513235
AT2G42880.1	CDX79842	AT2G42880.1	19513235
AT2G42880.1	CDX83515	AT2G42880.1	19513235
AT2G42880.1	CDY42817	AT2G42880.1	19513235
AT2G42880.1	CDY60195	AT2G42880.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004727.1-P	Field mustard	cytosol	85.09	99.06
AT2G42880.1	Thale cress	cytosol	94.49	96.2
CDY60195	Canola	cytosol	97.89	91.93
CDY42817	Canola	cytosol	89.79	86.29
CDX83515	Canola	cytosol	89.95	86.05
TraesCS7B01G246900.3	Wheat	cytosol	54.78	80.28
TraesCS7A01G335300.2	Wheat	cytosol	54.78	80.28
TraesCS7D01G342800.3	Wheat	cytosol	54.78	80.28
HORVU7Hr1G082510.4	Barley	cytosol	54.62	80.05
VIT_12s0142g00130.t01	Wine grape	cytosol	73.91	74.75
KRH46057	Soybean	cytosol	73.42	73.66
Solyc07g056350.2.1	Tomato	cytosol	74.07	73.59
PGSC0003DMT400044709	Potato	cytosol	73.1	73.57
KRG98916	Soybean	cytosol	73.1	73.45
KRH14477	Soybean	cytosol	71.64	72.34
GSMUA_Achr9P06770_001	Banana	cytosol	68.72	72.23
GSMUA_Achr6P27100_001	Banana	cytosol	70.83	71.76
Os01t0629900-01	Rice	cytosol	70.5	71.19
KXG32937	Sorghum	cytosol	70.5	70.96
CDX92058	Canola	cytosol	34.85	70.96
TraesCS3B01G256700.1	Wheat	cytosol	68.72	70.43
TraesCS3A01G228000.1	Wheat	cytosol	69.53	69.98
TraesCS3D01G225600.1	Wheat	cytosol	69.37	69.82
KRH73659	Soybean	cytosol	70.99	69.63
HORVU3Hr1G056200.1	Barley	cytosol	69.21	69.54
Zm00001d011426_P002	Maize	cytosol	69.69	64.95
CDX97596	Canola	cytosol	62.24	64.76
CDY20079	Canola	cytosol	62.88	64.34
CDX98489	Canola	cytosol	62.4	64.27
CDY32347	Canola	cytosol	62.72	64.18
CDX92566	Canola	cytosol	58.02	63.81
CDY13942	Canola	cytosol	57.86	63.75
Os06t0367900-01	Rice	cytosol	58.51	63.33
CDX70861	Canola	cytosol	57.21	63.15
CDY66706	Canola	cytosol	57.21	63.15
CDY60212	Canola	cytosol	57.37	63.1
CDY25849	Canola	cytosol	57.37	62.65
CDY17674	Canola	cytosol	49.43	62.63
CDY41084	Canola	cytosol	49.27	62.42
CDX77826	Canola	cytosol	49.27	62.42
CDY40377	Canola	cytosol	49.27	62.3
CDY45117	Canola	cytosol	59.48	61.99
CDY24091	Canola	cytosol	58.83	61.84
GSMUA_AchrUn_...	Banana	nucleus	62.07	61.38
CDX83865	Canola	cytosol	27.23	58.74
CDY49620	Canola	cytosol, nucleus	56.08	58.45
CDX92190	Canola	plastid	56.24	58.42
CDY26184	Canola	cytosol	53.65	56.97
CDY21718	Canola	cytosol	53.16	56.75
CDY60775	Canola	cytosol	53.65	56.68
CDX81862	Canola	cytosol	53.16	56.45
CDY11098	Canola	mitochondrion	51.7	55.29
CDX68218	Canola	mitochondrion	51.54	55.21
CDY63829	Canola	peroxisome	49.27	53.24
CDX99153	Canola	cytosol	26.58	49.25
CDX86029	Canola	cytosol	28.2	47.03
CDX74352	Canola	cytosol	27.71	45.84
CDX91889	Canola	cytosol	27.71	45.84
CDX79801	Canola	cytosol	29.01	45.66
CDY17911	Canola	cytosol	29.01	45.66
CDY22716	Canola	cytosol	27.07	45.01
CDY44256	Canola	cytosol	28.69	44.81
CDX83459	Canola	cytosol	28.69	44.81
CDY13253	Canola	cytosol	27.07	44.77
CDY06283	Canola	cytosol	26.42	43.94
CDY05980	Canola	cytosol	27.55	43.7
CDX93447	Canola	cytosol	26.09	43.63
CDX94915	Canola	cytosol	25.93	43.36
CDY18876	Canola	cytosol	25.28	43.33
CDX74788	Canola	cytosol	25.28	43.33
CDY05979	Canola	cytosol	28.04	43.25
CDY27334	Canola	cytosol	25.12	43.06
CDY44551	Canola	cytosol	25.77	42.97
CDY46308	Canola	cytosol	25.61	42.93
CDY37087	Canola	cytosol	24.96	42.78
CDY45885	Canola	cytosol	25.45	42.43
CDX71876	Canola	cytosol	27.23	42.11
CDY45782	Canola	cytosol	26.58	41.94
CDX89033	Canola	cytosol	25.93	41.03
CDX89034	Canola	cytosol	26.09	40.86
CDY53276	Canola	cytosol	25.77	38.04
CDX67813	Canola	cytosol	27.23	37.25
CDX86793	Canola	cytosol	27.23	35.9
CDX98395	Canola	cytosol	27.07	35.31
CDY30325	Canola	endoplasmic reticulum, plasma membrane	25.77	33.97

Protein Annotations

KEGG:04150+2.7.11.24	Gene3D:1.10.510.10	MapMan:18.4.3.6	Gene3D:3.30.200.20	GO:A0A078CSW5	EnsemblPlants:CDX79842
ProteinID:CDX79842	ProteinID:CDX79842.1	GO:GO:0000165	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004707	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00132686001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:MAP_kinase_CS
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS01351	PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF195
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	UniParc:UPI0004EF2A16	SEG:seg

Description

BnaA05g03140D

Coordinates

chrLK031819:+:444605..448831

Molecular Weight (calculated)

69981.2 Da

IEP (calculated)

9.793

GRAVY (calculated)

-0.468

Length

617 amino acids

Sequence
(BLAST)

001: MMQADPQRKK NNLEMEFFSD YGDASRFKIQ EVIGKGSYGV VCSAIDTLTG EKVAIKKIHD IFEHISDAAR ILREIKLLRL LRHPDIVEIK HIMLPPSRRE
101: FKDIYVVFEL MESDLHQVIK ANDDLTKEHY QFFLYQLLRA LKYIHTANVY HRDLKPKNIL ANANCKLKIC DFGLARVAFN DTPTTIFWTD YVATRWYRAP
201: ELCGSFYSKY TPAIDIWSIG CIFAEVLMGK PLFPGKNVVH QLDLMTDLLG TPSMDTISRV RNEKARRYLT SMRKKPPIPF TQKFPNADPL SLKLLERLLA
301: FDPKDRPTAE EALADPYFKG LAKVEREPSC QPITKMEFEF ERRKVTKEDI RELISREILE YHPQLLKDHM SGADKTNFLY PSAVDQFRRQ FAHLEENSGK
401: TGPVAPLERK HASLPRSTVI HSTAVARGGQ PKLMNNTNTL NPETTQNIPL NHHATLQAQQ RNLSAAKPSA FMGPVAPFDN GRTSRDAYDP RSFIRSTTTS
501: LPFQQQSAST AAMGKQQERR TTTTTTMESE RQARQISQYN RYAQPDVAIN IDNNPFIMAR TGMHKAENMS DHRIIIDTNL LQATAGIGVA AAAAAAAPGG
601: SAHRKVGGVR YGMSKMY

Best Arabidopsis Sequence Match ( AT2G42880.1 )
(BLAST)

001: MQQDNRKKNN LEMEFFSDYG DANRFKVQEV IGKGSYGVVC SAIDTLTGEK VAIKKIHDIF EHISDAARIL REIKLLRLLR HPDIVEIKHI MLPPSRREFK
101: DIYVVFELME SDLHQVIKAN DDLTREHYQF FLYQLLRALK YIHTANVYHR DLKPKNILAN ANCKLKICDF GLARVAFNDT PTTIFWTDYV ATRWYRAPEL
201: CGSFYSKYTP AIDIWSIGCI FAEVLMGKPL FPGKNVVHQL DLMTDLLGTP SLDTISRVRN EKARRYLTSM RKKPPIPFAQ KFPNADPLSL KLLERLLAFD
301: PKDRPTAEEA LADPYFKGLA KVEREPSCQP ITKMEFEFER RKVTKEDIRE LISREILEYH PQLLKDHMNG ADKASFLYPS AVDQFRRQFA HLEENSGKTG
401: PVAPLERKHA SLPRSTVIHS TAVARGGQPK LMNNTNTLNP ETTQNIPFNH ATIQAQQRNL SAAKPSTFMG PVAPFDNGRI SRDAYDPRSF IRSTNLPFSQ
501: QSAATVAMGK QQERRTTMEP EKQARQISQY NRYAPDVAIN IDNNPFIMAR TGMNKAENIS DRIIIDTNLL QATAGIGVAA AAAAAAPGGS AHRKVGAVRY
601: GMSKMY

Arabidopsis Description

MPK20Mitogen-activated protein kinase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJG9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.