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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX68224
CDX79842
CDX82067
CDX83515
CDY11103
CDY42817
CDY60195
CDY71921

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G42880.1 CDX68224 AT1G73500.1 19513235
AT2G42880.1 CDX82067 AT1G73500.1 19513235
AT2G42880.1 CDY11103 AT1G73500.1 19513235
AT2G42880.1 CDY71921 AT1G73500.1 19513235
AT2G42880.1 CDX79842 AT2G42880.1 19513235
AT2G42880.1 CDX83515 AT2G42880.1 19513235
AT2G42880.1 CDY42817 AT2G42880.1 19513235
AT2G42880.1 CDY60195 AT2G42880.1 19513235
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000277.1-P Field mustard cytosol 100.0 100.0
CDY42817 Canola cytosol 97.05 97.51
AT2G42880.1 Thale cress cytosol 85.43 90.92
CDX79842 Canola cytosol 86.05 89.95
CDY60195 Canola cytosol 88.22 86.61
TraesCS7D01G342800.3 Wheat cytosol 51.01 78.15
TraesCS7B01G246900.3 Wheat cytosol 51.01 78.15
TraesCS7A01G335300.2 Wheat cytosol 51.01 78.15
HORVU7Hr1G082510.4 Barley cytosol 50.85 77.91
VIT_12s0142g00130.t01 Wine grape cytosol 69.77 73.77
Solyc07g056350.2.1 Tomato cytosol 68.84 71.5
PGSC0003DMT400044709 Potato cytosol 67.91 71.45
KRH46057 Soybean cytosol 67.75 71.06
KRG98916 Soybean cytosol 67.44 70.85
CDX92058 Canola cytosol 33.02 70.3
GSMUA_Achr6P27100_001 Banana cytosol 66.36 70.28
GSMUA_Achr9P06770_001 Banana cytosol 63.72 70.02
KRH14477 Soybean cytosol 66.05 69.72
KXG32937 Sorghum cytosol 64.65 68.03
Os01t0629900-01 Rice cytosol 64.34 67.92
TraesCS3B01G256700.1 Wheat cytosol 62.64 67.11
KRH73659 Soybean cytosol 65.43 67.09
TraesCS3A01G228000.1 Wheat cytosol 63.26 66.56
HORVU3Hr1G056200.1 Barley cytosol 63.26 66.45
TraesCS3D01G225600.1 Wheat cytosol 63.1 66.39
CDY60212 Canola cytosol 55.35 63.64
CDY25849 Canola cytosol 55.35 63.19
Zm00001d011426_P002 Maize cytosol 64.5 62.84
CDY20079 Canola cytosol 58.6 62.69
CDX97596 Canola cytosol 57.52 62.56
CDY32347 Canola cytosol 58.45 62.52
Os06t0367900-01 Rice cytosol 55.19 62.46
CDY13942 Canola cytosol 54.11 62.32
CDX98489 Canola cytosol 57.83 62.27
CDX92566 Canola cytosol 53.95 62.03
CDY41084 Canola cytosol 46.82 62.01
CDY40377 Canola cytosol 46.82 61.89
CDY17674 Canola cytosol 46.67 61.81
CDY66706 Canola cytosol 53.49 61.72
CDX70861 Canola cytosol 53.49 61.72
CDX77826 Canola cytosol 46.51 61.6
CDY24091 Canola cytosol 55.35 60.82
CDY45117 Canola cytosol 55.81 60.81
GSMUA_AchrUn_... Banana nucleus 57.52 59.46
CDY49620 Canola cytosol, nucleus 52.4 57.09
CDX92190 Canola plastid 52.56 57.07
CDX83865 Canola cytosol 24.96 56.29
CDY26184 Canola cytosol 50.08 55.59
CDY21718 Canola cytosol 49.61 55.36
CDY60775 Canola cytosol 50.08 55.31
CDX81862 Canola cytosol 49.61 55.08
CDX68218 Canola mitochondrion 48.37 54.17
CDY11098 Canola mitochondrion 48.37 54.07
CDY63829 Canola peroxisome 46.98 53.06
CDX99153 Canola cytosol 24.96 48.35
CDX86029 Canola cytosol 26.51 46.22
CDX74352 Canola cytosol 26.2 45.31
CDX91889 Canola cytosol 26.2 45.31
CDX79801 Canola cytosol 27.29 44.9
CDY17911 Canola cytosol 27.13 44.64
CDY13253 Canola cytosol 25.74 44.5
CDX83459 Canola cytosol 27.13 44.3
CDY44256 Canola cytosol 27.13 44.3
CDY22716 Canola cytosol 25.43 44.2
CDY06283 Canola cytosol 24.81 43.13
CDY18876 Canola cytosol 24.03 43.06
CDX74788 Canola cytosol 24.03 43.06
CDX94915 Canola cytosol 24.5 42.82
CDX93447 Canola cytosol 24.5 42.82
CDY27334 Canola cytosol 23.88 42.78
CDY05980 Canola cytosol 25.74 42.67
CDY37087 Canola cytosol 23.72 42.5
CDY05979 Canola cytosol 26.36 42.5
CDY44551 Canola cytosol 24.19 42.16
CDY46308 Canola cytosol 24.03 42.12
CDY45885 Canola cytosol 23.88 41.62
CDY45782 Canola cytosol 25.12 41.43
CDX71876 Canola cytosol 25.58 41.35
CDX89033 Canola cytosol 24.5 40.51
CDX89034 Canola cytosol 24.65 40.36
CDY53276 Canola cytosol 24.34 37.56
CDX67813 Canola cytosol 25.43 36.36
CDX86793 Canola cytosol 25.89 35.68
CDX98395 Canola cytosol 25.43 34.67
CDY30325 Canola endoplasmic reticulum, plasma membrane 24.34 33.55
Protein Annotations
KEGG:04150+2.7.11.24Gene3D:1.10.510.10MapMan:18.4.3.6Gene3D:3.30.200.20GO:A0A078D335EnsemblPlants:CDX83515
ProteinID:CDX83515ProteinID:CDX83515.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004707GO:GO:0004871GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00139111001InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:MAP_kinase_CS
PFAM:PF00069ScanProsite:PS00107ScanProsite:PS01351PFscan:PS50011PANTHER:PTHR24055PANTHER:PTHR24055:SF195
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112UniParc:UPI000253FCCESEG:seg
Description
BnaA03g19910D
Coordinates
chrLK031832:+:1899759..1903951
Molecular Weight (calculated)
72999.3 Da
IEP (calculated)
8.856
GRAVY (calculated)
-0.462
Length
645 amino acids
Sequence
(BLAST)
001: MEFFSDYGDA TRFKIQERIG KGSYGVVCSA IDTLTGEKVA IKKIHDIFEH ISDAARILRE IKLLRLLRHP DIVEIKHIML PPSRREFKDI YVVFELMESD
101: LHQVIKANDD LTREHYQFFL YQLLRALKYI HTANVYHRDL KPKNILANAN CKLKICDFGL ARVAFNDTPT TIIWTDYVAT RWYRAPELCG SFYSKYTPAI
201: DIWSIGCIFA EVLMGKPLFP GKNVVHQLDL MTDLLGTPSL DTISRVRNEK ARRYLTSMRK KPPIPFTQKF PNADPLSLKL LERLLAFDPK DRPTAQEALA
301: DPYFKGLAKV EREPSCQPIT KMEFEFERRK VTKEDIRELI SREILEYHPQ LLKDHMNGAD KTNFLYPSAV DQFRRQFAHL EENSGKTGPV APLERKHASL
401: PRSTVIHSTA VARGGQPKLM NNTNTLNPET TQSIPLNQYT TSQAPQRNLS GTKPSTFMGP VAPYDNGRTS REAYDPRSLI RSTALPFPQQ SAAATMGKQQ
501: ERRTTTMESE KQARQISQYN RYSPDVAINI DNNPFILSRT GLHKAENMSD RITIDTNLLQ ATAGIGVAAA AAPGGSAHRK VGAVRNDRQG SDVLTFRELL
601: ATEDVAEFTV QAHDDDDDGL IFDGTTNTCG SKIPHYTEIT LSLHL
Best Arabidopsis Sequence Match ( AT2G42880.1 )
(BLAST)
001: MQQDNRKKNN LEMEFFSDYG DANRFKVQEV IGKGSYGVVC SAIDTLTGEK VAIKKIHDIF EHISDAARIL REIKLLRLLR HPDIVEIKHI MLPPSRREFK
101: DIYVVFELME SDLHQVIKAN DDLTREHYQF FLYQLLRALK YIHTANVYHR DLKPKNILAN ANCKLKICDF GLARVAFNDT PTTIFWTDYV ATRWYRAPEL
201: CGSFYSKYTP AIDIWSIGCI FAEVLMGKPL FPGKNVVHQL DLMTDLLGTP SLDTISRVRN EKARRYLTSM RKKPPIPFAQ KFPNADPLSL KLLERLLAFD
301: PKDRPTAEEA LADPYFKGLA KVEREPSCQP ITKMEFEFER RKVTKEDIRE LISREILEYH PQLLKDHMNG ADKASFLYPS AVDQFRRQFA HLEENSGKTG
401: PVAPLERKHA SLPRSTVIHS TAVARGGQPK LMNNTNTLNP ETTQNIPFNH ATIQAQQRNL SAAKPSTFMG PVAPFDNGRI SRDAYDPRSF IRSTNLPFSQ
501: QSAATVAMGK QQERRTTMEP EKQARQISQY NRYAPDVAIN IDNNPFIMAR TGMNKAENIS DRIIIDTNLL QATAGIGVAA AAAAAAPGGS AHRKVGAVRY
601: GMSKMY
Arabidopsis Description
MPK20Mitogen-activated protein kinase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJG9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.