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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX67813
CDX68224
CDX71876
CDX77690
CDX79256
CDX79596
CDX79952
CDX82067
CDX84225
CDX84616
CDX87454
CDX87678
CDX88437
CDX89033
CDX89034
CDX90141
CDX94599
CDX96246
CDX96247
CDX98395
CDY05979
CDY05980
CDY11103
CDY14349
CDY14617
CDY15683
CDY22506
CDY23869
CDY26860
CDY31674
CDY35426
CDY35728
CDY37148
CDY45782
CDY58504
CDY65903
CDY71921

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G59790.1 CDX90141 AT1G28280.1 24750137
AT3G59790.1 CDX94599 AT1G28280.1 24750137
AT3G59790.1 CDY15683 AT1G28280.1 24750137
AT3G59790.1 CDY35728 AT1G28280.1 24750137
AT3G59790.1 CDX68224 AT1G73500.1 19513235
AT3G59790.1 CDX82067 AT1G73500.1 19513235
AT3G59790.1 CDY11103 AT1G73500.1 19513235
AT3G59790.1 CDY71921 AT1G73500.1 19513235
AT3G59790.1 CDX79256 AT1G78310.1 24750137
AT3G59790.1 CDX87454 AT1G78310.1 24750137
AT3G59790.1 CDX88437 AT1G78310.1 24750137
AT3G59790.1 CDY14617 AT1G78310.1 24750137
AT3G59790.1 CDY26860 AT1G78310.1 24750137
AT3G59790.1 CDX79596 AT2G35230.1 24750137
AT3G59790.1 CDX84225 AT2G35230.1 24750137
AT3G59790.1 CDX84616 AT2G35230.1 24750137
AT3G59790.1 CDY31674 AT2G35230.1 24750137
AT3G59790.1 CDX79952 AT2G41180.1 24750137
AT3G59790.1 CDY22506 AT2G41180.1 24750137
AT3G59790.1 CDY23869 AT2G41180.1 24750137
AT3G59790.1 CDY35426 AT2G41180.1 24750137
AT3G59790.1 CDX67813 AT3G59790.1 19513235
AT3G59790.1 CDX71876 AT3G59790.1 19513235
AT3G59790.1 CDX89033 AT3G59790.1 19513235
AT3G59790.1 CDX89034 AT3G59790.1 19513235
AT3G59790.1 CDX98395 AT3G59790.1 19513235
AT3G59790.1 CDY05979 AT3G59790.1 19513235
AT3G59790.1 CDY05980 AT3G59790.1 19513235
AT3G59790.1 CDY45782 AT3G59790.1 19513235
AT3G59790.1 CDX77690 AT5G46780.1 24750137
AT3G59790.1 CDX87678 AT5G46780.1 24750137
AT3G59790.1 CDY37148 AT5G46780.1 24750137
AT3G59790.1 CDY58504 AT5G46780.1 24750137
AT3G59790.1 CDX96246 AT5G53830.1 24750137
AT3G59790.1 CDX96247 AT5G53830.1 24750137
AT3G59790.1 CDY14349 AT5G53830.1 24750137
AT3G59790.1 CDY65903 AT5G53830.1 24750137
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX67813 Canola cytosol 91.12 95.57
CDY05980 Canola cytosol 53.91 65.55
HORVU7Hr1G023760.2 Barley cytosol 50.53 65.12
CDX71876 Canola cytosol 53.91 63.91
CDY05979 Canola cytosol 53.91 63.75
CDY45782 Canola cytosol 52.64 63.68
CDX89033 Canola cytosol 52.01 63.08
GSMUA_Achr2P19320_001 Banana cytosol 50.53 63.06
GSMUA_Achr10P... Banana cytosol 50.74 62.83
CDX89034 Canola cytosol 52.22 62.69
KRH71277 Soybean nucleus 51.8 62.66
GSMUA_Achr5P06640_001 Banana cytosol 50.53 62.57
AT3G59790.1 Thale cress cytosol 51.59 62.09
CDY17911 Canola cytosol 51.37 61.99
CDX79801 Canola cytosol 51.16 61.73
Solyc08g014420.2.1 Tomato cytosol 51.16 61.42
TraesCS7B01G009200.1 Wheat nucleus 50.95 61.32
Solyc12g019460.1.1 Tomato cytosol 51.16 61.11
VIT_05s0094g00900.t01 Wine grape cytosol 51.37 61.06
CDX83459 Canola cytosol 50.95 61.01
CDY44256 Canola cytosol 50.95 61.01
TraesCS7A01G111300.1 Wheat golgi 50.95 60.86
TraesCS7D01G106400.1 Wheat cytosol 50.53 60.81
Os06t0154500-01 Rice plasma membrane 50.74 60.3
CDX99153 Canola cytosol 42.28 60.06
Zm00001d045310_P003 Maize cytosol 50.53 60.05
Zm00001d036215_P003 Maize cytosol, extracellular 50.53 60.05
EER89222 Sorghum cytosol 50.95 59.95
CDX86029 Canola cytosol 46.09 58.92
CDY13253 Canola cytosol 45.88 58.18
CDY06283 Canola cytosol 45.03 57.41
CDX74352 Canola cytosol 45.24 57.37
CDX91889 Canola cytosol 45.24 57.37
CDY22716 Canola cytosol 44.82 57.14
KRH50176 Soybean cytosol, nucleus 51.8 56.58
CDY18876 Canola cytosol 42.71 56.11
CDY37087 Canola cytosol 42.28 55.56
CDX74788 Canola cytosol 42.07 55.28
CDY27334 Canola cytosol 42.07 55.28
CDX86793 Canola cytosol 48.41 48.93
CDX94915 Canola cytosol 37.42 47.97
CDX93447 Canola cytosol 37.42 47.97
CDY44551 Canola cytosol 36.79 47.03
CDY45885 Canola cytosol 36.15 46.22
CDY46308 Canola cytosol 35.94 46.2
CDY53276 Canola cytosol 35.31 39.95
CDX92058 Canola cytosol 24.52 38.28
CDY30325 Canola endoplasmic reticulum, plasma membrane 35.31 35.68
CDX83865 Canola cytosol 19.87 32.87
CDX77826 Canola cytosol 32.77 31.83
CDY17674 Canola cytosol 32.77 31.83
CDY40377 Canola cytosol 32.77 31.76
CDY41084 Canola cytosol 32.56 31.62
CDY66706 Canola cytosol 36.15 30.59
CDX70861 Canola cytosol 35.94 30.41
CDY13942 Canola cytosol 35.73 30.18
CDX92566 Canola cytosol 35.73 30.12
CDY21718 Canola cytosol 34.46 28.2
CDY24091 Canola cytosol 34.67 27.94
CDX81862 Canola cytosol 34.25 27.88
CDY25849 Canola cytosol 32.98 27.61
CDY26184 Canola cytosol 33.83 27.54
CDY45117 Canola cytosol 34.46 27.53
CDY60212 Canola cytosol 32.56 27.45
CDX68218 Canola mitochondrion 33.4 27.43
CDY11098 Canola mitochondrion 33.4 27.38
CDY60775 Canola cytosol 33.62 27.23
CDY49620 Canola cytosol, nucleus 34.04 27.2
CDY63829 Canola peroxisome 32.77 27.15
CDX92190 Canola plastid 34.04 27.1
CDX79842 Canola cytosol 35.31 27.07
CDX98489 Canola cytosol 34.25 27.05
CDX97596 Canola cytosol 33.83 26.98
CDY20079 Canola cytosol 34.04 26.7
CDY32347 Canola cytosol 33.83 26.53
CDY42817 Canola cytosol 34.88 25.7
CDY60195 Canola cytosol 35.52 25.57
CDX83515 Canola cytosol 34.67 25.43
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.3.6Gene3D:3.30.200.20GO:A0A078E8G6EnsemblPlants:CDX98395ProteinID:CDX98395
ProteinID:CDX98395.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00105978001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF00069PIRSF:PIRSF000615ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24055
PANTHER:PTHR24055:SF214InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EED4D8:::::
Description
BnaC06g17560D
Coordinates
chrLK031904:+:1075599..1078412
Molecular Weight (calculated)
54126.0 Da
IEP (calculated)
6.202
GRAVY (calculated)
-0.275
Length
473 amino acids
Sequence
(BLAST)
001: MEPIPNDAKY VRYNISGNIF EVPAKYKPPI MTLGSGGYGL VCSAVNSESN ETVAIKKIMH ACENPIQAKR TLREIKLLRH LEHENIVGIK DIIVPPQRDF
101: FEDVYIAFEM MDSDLYKVIT SYEKLTKDHY QYFLYQILRG LKYIHSANVL HRDLKPSNLL VSVKCELKIC DFGLARAASE TYAMTEYVTT RWYRAPELLL
201: NSSTYTTAID MWSVGCIFLE LMTGRPLFPG RDHVHQFCLI LELIGSPTEY DIGSLNDSAK QYLRQLPWFD RQSLYLKFPN VPYSAIDLVE KMLKFDPRQR
301: ISVEDALAHP FLETLHDITD EPVCTKPFDV DLEEHPLAVE QIKELIYQEA LAFNAVQQQL KRKSDFAFLQ CYGDYKQDVL VVPNKISVKF GAQTFSWTAE
401: KLETTGLPTS PSSKDVRSRV SKHESQLPDE TLEGLHNASS SSLETLTSQD KIVFNRKACV CSERTMVLEG QKQ
Best Arabidopsis Sequence Match ( AT1G07880.2 )
(BLAST)
001: MEKREDGGIL TYDGRYVMYN VLGNIFELSS KYIPPIEPIG RGAYGIVCCA TNSETNEEVA IKKIANAFDN RVDAKRTLRE IKLLSHMDHD NVIKIKDIIE
101: LPEKERFEDV YIVYELMDTD LHQIIRSTQT LTDDHCQYFL YQILRGLKYI HSANVLHRDL KPSNLVLNTN CDLKICDFGL ARTSNETEIM TEYVVTRWYR
201: APELLLNSSE YTGAIDIWSV GCIFMEILRR ETLFPGKDYV QQLKLITELL GSPDDSDLDF LRSDNARKYV KQLPHVQKQS FREKFPNISP MALDLAEKML
301: VFDPSKRITV DEALKQPYLA SLHEINEEPT CPTPFSFDFE ETALDEQDIK ELVWRESLHF KNM
Arabidopsis Description
MPK13Mitogen-activated protein kinase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQQ9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.