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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70254
CDX73678
CDX77841
CDX80384
CDX80907
CDX88046
CDX92401
CDX95314
CDY23174
CDY30932
CDY41394
CDY67472

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G53510.1 CDX77841 AT3G44720.1 21798944
AT1G53510.1 CDY30932 AT3G44720.1 21798944
AT1G53510.1 CDX73678 AT3G51920.1 17360592
AT1G53510.1 CDX95314 AT3G51920.1 17360592
AT1G53510.1 CDY23174 AT3G51920.1 17360592
AT1G53510.1 CDX70254 AT5G04170.1 21798944
AT1G53510.1 CDX80907 AT5G04170.1 21798944
AT1G53510.1 CDY41394 AT5G04170.1 21798944
AT1G53510.1 CDY67472 AT5G04170.1 21798944
AT1G53510.1 CDX92401 AT5G21274.1 17360592
AT1G53510.1 CDX80384 AT5G23720.1 19392697
AT1G53510.1 CDX88046 AT5G23720.1 19392697
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY25849 Canola cytosol 98.04 97.35
CDY45117 Canola cytosol 88.95 84.29
CDY24091 Canola cytosol 86.63 82.79
AT1G53510.1 Thale cress cytosol 89.66 81.79
KRH21856 Soybean cytosol 63.46 77.39
CDX98489 Canola cytosol 79.14 74.12
CDX97596 Canola cytosol 78.25 74.03
CDY20079 Canola cytosol 79.32 73.8
CDY32347 Canola cytosol 79.14 73.63
KRH13458 Soybean cytosol 73.62 68.04
CDX92058 Canola cytosol 36.19 67.0
Solyc07g062080.2.1 Tomato cytosol 71.48 66.83
PGSC0003DMT400018188 Potato cytosol 71.48 66.5
VIT_19s0014g00220.t01 Wine grape cytosol 69.7 65.38
PGSC0003DMT400054750 Potato cytosol 67.02 63.41
Solyc10g007500.2.1 Tomato cytosol 66.13 62.56
CDY41084 Canola cytosol 50.8 58.52
CDY17674 Canola cytosol 50.8 58.52
CDX77826 Canola cytosol 50.62 58.32
CDY40377 Canola cytosol 50.62 58.2
CDY13942 Canola cytosol 57.4 57.5
CDX79842 Canola cytosol 63.1 57.37
CDY66706 Canola cytosol 57.04 57.25
CDX70861 Canola cytosol 57.04 57.25
CDX92566 Canola cytosol 57.22 57.22
CDY42817 Canola cytosol 63.46 55.45
CDX83515 Canola cytosol 63.64 55.35
CDX83865 Canola cytosol 27.63 54.2
CDY60195 Canola cytosol 63.1 53.88
CDY49620 Canola cytosol, nucleus 55.08 52.2
CDX92190 Canola plastid 55.26 52.19
CDY26184 Canola cytosol 53.83 51.98
CDY60775 Canola cytosol 54.01 51.88
CDX68218 Canola mitochondrion 52.58 51.22
CDY11098 Canola mitochondrion 52.58 51.13
CDY21718 Canola cytosol 52.58 51.04
CDX81862 Canola cytosol 52.76 50.95
CDY63829 Canola peroxisome 50.98 50.09
CDX99153 Canola cytosol 27.27 45.95
CDY13253 Canola cytosol 29.59 44.5
CDX74352 Canola cytosol 29.23 43.97
CDX91889 Canola cytosol 29.23 43.97
CDX86029 Canola cytosol 28.88 43.78
CDY22716 Canola cytosol 28.88 43.67
CDY06283 Canola cytosol 28.52 43.13
CDX74788 Canola cytosol 27.27 42.5
CDY27334 Canola cytosol 27.27 42.5
CDY18876 Canola cytosol 27.27 42.5
CDY37087 Canola cytosol 27.09 42.22
CDX94915 Canola cytosol 27.63 42.01
CDY45885 Canola cytosol 27.63 41.89
CDX93447 Canola cytosol 27.45 41.73
CDY44551 Canola cytosol 27.45 41.62
CDY46308 Canola cytosol 27.27 41.58
CDX79801 Canola cytosol 28.7 41.07
CDY05980 Canola cytosol 28.34 40.87
CDY17911 Canola cytosol 28.52 40.82
CDX83459 Canola cytosol 28.7 40.76
CDY44256 Canola cytosol 28.7 40.76
CDY05979 Canola cytosol 29.06 40.75
CDX71876 Canola cytosol 28.16 39.6
CDY45782 Canola cytosol 27.45 39.39
CDX89033 Canola cytosol 26.92 38.72
CDX89034 Canola cytosol 26.74 38.07
CDY53276 Canola cytosol 28.34 38.04
CDX86793 Canola cytosol 29.95 35.9
CDX67813 Canola cytosol 27.63 34.37
CDY30325 Canola endoplasmic reticulum, plasma membrane 28.34 33.97
CDX98395 Canola cytosol 27.45 32.56
Protein Annotations
KEGG:04150+2.7.11.24Gene3D:1.10.510.10MapMan:18.4.3.6Gene3D:3.30.200.20GO:A0A078J968UniProt:A0A078J968
EnsemblPlants:CDY60212ProteinID:CDY60212ProteinID:CDY60212.1GO:GO:0000165GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0004707GO:GO:0004871GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006464GO:GO:0006468
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00028298001InterPro:IPR000719InterPro:Kinase-like_dom_sf
InterPro:MAP_kinase_CSPFAM:PF00069ScanProsite:PS00107ScanProsite:PS01351PFscan:PS50011PANTHER:PTHR24055
PANTHER:PTHR24055:SF200InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112UniParc:UPI0004EE2A98
SEG:seg:::::
Description
BnaCnng35890DMitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A078J968]
Coordinates
chrLK033854:-:37890..40912
Molecular Weight (calculated)
63490.3 Da
IEP (calculated)
9.630
GRAVY (calculated)
-0.377
Length
561 amino acids
Sequence
(BLAST)
001: MEFFTEYGDA NRYRILEVIG KGSYGVVCAA IDTHTGEKVA IKKINDIFEH ISDALRILRE VKLLRLLRHP DIVEIKSIML PPSKREFKDI YVVFELMESD
101: LHQVIKANDD LTRDHHQFFL YQMLRALKFM HTANVYHRDL KPKNILANAN SKLKVCDFGL ARVAFNDTPT TVLWTDYVAT RWYRAPELCG SFFTKYTPAI
201: DIWSIGCIFA EVLTGKPLFP GKSISHQLEL ITDLLGTPKP ETISGVRNDK ARKYLSEMKK KNPVTFSQKF SKADPLAIRL LQRLLAFDPK DRPTAAEALT
301: DPYFKGLAKV EREPSCQPIS KMEFEFERRR LTKDDIRELI YREILEYHPQ LLKDYMSGSE GSSFVYPSAI GHLRKQFNYL EENSSRNGPV IPLERKHVSL
401: PRSTVHSSVV HSTSQPIPAG TRALGPPPRV PPSGRAGRVV ESSVSYENGR NLKEAYFRSA VSSPHCYFKA NTMMNLNNSK VEASFQPKPQ EFVTVPPAAR
501: TNQTNVEIVN RPNPYFQSQV PNIEQSSNNN NMAIDAKLLQ AQSQFGPAGA AAVAVAAHMN L
Best Arabidopsis Sequence Match ( AT1G53510.1 )
(BLAST)
001: MQQNQVKKGT KEMEFFTEYG DANRYRILEV IGKGSYGVVC AAIDTHTGEK VAIKKINDVF EHISDALRIL REVKLLRLLR HPDIVEIKSI MLPPSKREFK
101: DIYVVFELME SDLHQVIKAN DDLTREHHQF FLYQMLRALK FMHTANVYHR DLKPKNILAN ANCKLKVCDF GLARVAFNDT PTTVFWTDYV ATRWYRAPEL
201: CGSFFSKYTP AIDVWSIGCI FAEVLTGKPL FPGKSVVHQL ELITDLLGTP KSETISGVRN DKARKYLTEM RKKNPVTFSQ KFSKADPLAL RLLQRLLAFD
301: PKDRPTPAEA LADPYFKGLS KIEREPSSQQ ISKMEFEFER RRLTKDDIRE LIYREILEYH PQLLKDYMSG SEGSNFVYPS AIGHLRQQFT YLEENSSRNG
401: PVIPLERKHA SLPRSTVHST VVHSTSQPNL GATDSRRVSF EPSKNGASSA GHPSTSAYPT KSIGPPPRVP PSGRPGRVVE SSVSYENGRN LKEAYFRSAV
501: SSPHCYFRPN TMTNPENRNI EASSFPPKPQ NPVHQFSPTE PPAATTNQAD VETMNHPNPY FQPQLPKTDQ LNNNTHMAID AKLLQAQSQF GPAGAAAVAV
601: AAHRNIGTIS YSAAS
Arabidopsis Description
MPK18Mitogen-activated protein kinase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5C0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.