CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX70254
CDX73678
CDX77841
CDX80384
CDX80907
CDX88046
CDX92401
CDX95314
CDY23174
CDY30932
CDY41394
CDY67472

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53510.1	CDX77841	AT3G44720.1	21798944
AT1G53510.1	CDY30932	AT3G44720.1	21798944
AT1G53510.1	CDX73678	AT3G51920.1	17360592
AT1G53510.1	CDX95314	AT3G51920.1	17360592
AT1G53510.1	CDY23174	AT3G51920.1	17360592
AT1G53510.1	CDX70254	AT5G04170.1	21798944
AT1G53510.1	CDX80907	AT5G04170.1	21798944
AT1G53510.1	CDY41394	AT5G04170.1	21798944
AT1G53510.1	CDY67472	AT5G04170.1	21798944
AT1G53510.1	CDX92401	AT5G21274.1	17360592
AT1G53510.1	CDX80384	AT5G23720.1	19392697
AT1G53510.1	CDX88046	AT5G23720.1	19392697

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039676.1-P	Field mustard	cytosol	97.79	97.62
CDY45117	Canola	cytosol	95.4	94.59
CDY60212	Canola	cytosol	82.79	86.63
CDY25849	Canola	cytosol	82.79	86.02
AT1G53510.1	Thale cress	cytosol	88.76	84.72
KRH21856	Soybean	cytosol	62.35	79.57
CDY32347	Canola	cytosol	79.39	77.28
CDY20079	Canola	cytosol	79.39	77.28
CDX98489	Canola	cytosol	78.53	76.96
CDX97596	Canola	cytosol	77.68	76.9
KRH13458	Soybean	cytosol	71.89	69.52
Solyc07g062080.2.1	Tomato	cytosol	70.7	69.17
PGSC0003DMT400018188	Potato	cytosol	70.87	68.99
CDX92058	Canola	cytosol	35.26	68.32
VIT_19s0014g00220.t01	Wine grape	cytosol	67.63	66.39
PGSC0003DMT400054750	Potato	cytosol	64.57	63.91
Solyc10g007500.2.1	Tomato	cytosol	63.71	63.07
CDY13942	Canola	cytosol	56.56	59.29
CDX92566	Canola	cytosol	56.56	59.18
CDX77826	Canola	cytosol	49.06	59.14
CDY17674	Canola	cytosol	49.06	59.14
CDY41084	Canola	cytosol	48.89	58.93
CDX79842	Canola	cytosol	61.84	58.83
CDY40377	Canola	cytosol	48.89	58.81
CDX70861	Canola	cytosol	55.88	58.68
CDY66706	Canola	cytosol	55.88	58.68
CDY42817	Canola	cytosol	60.82	55.61
CDX83865	Canola	cytosol	27.09	55.59
CDX83515	Canola	cytosol	60.82	55.35
CDY60195	Canola	cytosol	61.84	55.25
CDY26184	Canola	cytosol	52.47	53.01
CDY21718	Canola	cytosol	51.96	52.77
CDX81862	Canola	cytosol	52.13	52.67
CDY60775	Canola	cytosol	52.3	52.57
CDX68218	Canola	mitochondrion	51.28	52.26
CDX92190	Canola	plastid	52.81	52.19
CDY49620	Canola	cytosol, nucleus	52.47	52.03
CDY11098	Canola	mitochondrion	51.11	51.99
CDY63829	Canola	peroxisome	49.06	50.44
CDX99153	Canola	cytosol	26.75	47.15
CDX91889	Canola	cytosol	28.96	45.58
CDX74352	Canola	cytosol	28.96	45.58
CDY22716	Canola	cytosol	28.62	45.28
CDY13253	Canola	cytosol	28.62	45.04
CDY06283	Canola	cytosol	28.28	44.74
CDX86029	Canola	cytosol	28.11	44.59
CDX79801	Canola	cytosol	28.96	43.37
CDY17911	Canola	cytosol	28.96	43.37
CDY45885	Canola	cytosol	27.26	43.24
CDX93447	Canola	cytosol	27.09	43.09
CDY44551	Canola	cytosol	27.09	42.97
CDX94915	Canola	cytosol	26.92	42.82
CDY44256	Canola	cytosol	28.79	42.78
CDX83459	Canola	cytosol	28.79	42.78
CDY37087	Canola	cytosol	26.24	42.78
CDY27334	Canola	cytosol	26.06	42.5
CDY18876	Canola	cytosol	26.06	42.5
CDX74788	Canola	cytosol	26.06	42.5
CDY05980	Canola	cytosol	28.11	42.42
CDY46308	Canola	cytosol	26.58	42.39
CDY05979	Canola	cytosol	28.62	42.0
CDY45782	Canola	cytosol	27.43	41.18
CDX71876	Canola	cytosol	27.94	41.1
CDX89033	Canola	cytosol	27.09	40.77
CDX89034	Canola	cytosol	26.75	39.85
CDY53276	Canola	cytosol	27.26	38.28
CDX86793	Canola	cytosol	29.3	36.75
CDX67813	Canola	cytosol	27.94	36.36
CDX98395	Canola	cytosol	27.94	34.67
CDY30325	Canola	endoplasmic reticulum, plasma membrane	27.26	34.19

Protein Annotations

KEGG:04150+2.7.11.24	Gene3D:1.10.510.10	MapMan:18.4.3.6	Gene3D:3.30.200.20	GO:A0A078GFE8	UniProt:A0A078GFE8
EnsemblPlants:CDY24091	ProteinID:CDY24091	ProteinID:CDY24091.1	GO:GO:0000165	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004707	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00024638001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
InterPro:MAP_kinase_CS	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS01351	PFscan:PS50011	PANTHER:PTHR24055
PANTHER:PTHR24055:SF200	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	UniParc:UPI0004EEFE56
SEG:seg	:	:	:	:	:

Description

BnaA06g00890DMitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A078GFE8]

Coordinates

chrLK032153:+:429364..432739

Molecular Weight (calculated)

66185.9 Da

IEP (calculated)

9.672

GRAVY (calculated)

-0.495

Length

587 amino acids

Sequence
(BLAST)

001: MQQNQVKKDT KEMDFFTEYG DANRYRILEV IGKGSYGVVC AAVDTHTGEK VAIKKINNVF EHISDALRML REVKLLRLLR HPDIVEIKSI LLPPSKREFR
101: DIYVVFELME SDLHQVIKAN DDLTKEHHQF FLYQMLRALK FMHTANVYHR DLKPKNILAN ANCKLKVCDF GLARVAFNDT PTTVFWTDYV ATRWYRAPEL
201: CGSFFSKYTP AIDIWSIGCI FAEVLTGKPL FPGKSVAHQL ELITDLLGSP KSETISGVRN DKARKYLSEM RKKDPVTFSQ KFSKADPLAV RLLQKLLAFD
301: PKDRPTAAEA LADPYFKGLS KIEREPSCQP ISKMEFEFER RRLTKDDIRE LIYREILEYH PQLLKDYMSG SEGSSFVYPS AIGHLRKQFN YLEENSSRNG
401: PVIPPERKHV SLPRSTVHSS VVHSSSQPNL CATESRRVHF EQPSRNGAVP SGHSLTKALG PPPRAPPPSG RSSRVVEPSA SYENGRNHKE AYFRSAVSSP
501: HSLSQPKPQE FVHQYSPAVP PPAARTNQTN PYFQSHLPKT DQSSNNNNTQ MAIDATLLQA QSQFGPAAAV AVAAHRNVGT VGYSAAS

Best Arabidopsis Sequence Match ( AT1G53510.1 )
(BLAST)

001: MQQNQVKKGT KEMEFFTEYG DANRYRILEV IGKGSYGVVC AAIDTHTGEK VAIKKINDVF EHISDALRIL REVKLLRLLR HPDIVEIKSI MLPPSKREFK
101: DIYVVFELME SDLHQVIKAN DDLTREHHQF FLYQMLRALK FMHTANVYHR DLKPKNILAN ANCKLKVCDF GLARVAFNDT PTTVFWTDYV ATRWYRAPEL
201: CGSFFSKYTP AIDVWSIGCI FAEVLTGKPL FPGKSVVHQL ELITDLLGTP KSETISGVRN DKARKYLTEM RKKNPVTFSQ KFSKADPLAL RLLQRLLAFD
301: PKDRPTPAEA LADPYFKGLS KIEREPSSQQ ISKMEFEFER RRLTKDDIRE LIYREILEYH PQLLKDYMSG SEGSNFVYPS AIGHLRQQFT YLEENSSRNG
401: PVIPLERKHA SLPRSTVHST VVHSTSQPNL GATDSRRVSF EPSKNGASSA GHPSTSAYPT KSIGPPPRVP PSGRPGRVVE SSVSYENGRN LKEAYFRSAV
501: SSPHCYFRPN TMTNPENRNI EASSFPPKPQ NPVHQFSPTE PPAATTNQAD VETMNHPNPY FQPQLPKTDQ LNNNTHMAID AKLLQAQSQF GPAGAAAVAV
601: AAHRNIGTIS YSAAS

Arabidopsis Description

MPK18Mitogen-activated protein kinase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5C0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.