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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004959.1-P Field mustard cytosol 98.06 98.06
CDX74788 Canola cytosol 98.06 98.06
CDY27334 Canola cytosol 96.39 96.39
CDY37087 Canola cytosol 95.83 95.83
AT2G46070.3 Thale cress cytosol 94.72 83.99
CDX74352 Canola cytosol 75.28 72.65
CDX91889 Canola cytosol 75.28 72.65
KRH27898 Soybean cytosol 55.56 71.68
KRH77584 Soybean cytosol 74.44 71.47
KRH41233 Soybean cytosol 75.56 70.83
KRH59962 Soybean cytosol 75.0 70.13
CDY13253 Canola cytosol 69.72 67.29
CDY06283 Canola cytosol 63.06 61.19
CDY22716 Canola cytosol 63.06 61.19
CDX99153 Canola cytosol 55.0 59.46
CDX86029 Canola cytosol 60.0 58.38
CDY17911 Canola cytosol 61.67 56.63
CDX79801 Canola cytosol 61.67 56.63
CDY44256 Canola cytosol 61.94 56.46
CDX83459 Canola cytosol 61.39 55.95
CDY45782 Canola cytosol 58.06 53.45
CDX86793 Canola cytosol 69.44 53.42
CDX89033 Canola cytosol 57.78 53.33
CDX89034 Canola cytosol 56.67 51.78
CDY05980 Canola cytosol 55.56 51.41
CDY05979 Canola cytosol 56.11 50.5
CDX71876 Canola cytosol 54.44 49.12
CDY46308 Canola cytosol 49.17 48.1
CDX93447 Canola cytosol 49.17 47.97
CDX94915 Canola cytosol 48.89 47.7
CDY44551 Canola cytosol 48.33 47.03
CDY45885 Canola cytosol 47.78 46.49
CDX67813 Canola cytosol 56.39 45.01
CDX98395 Canola cytosol 56.11 42.71
CDY53276 Canola cytosol 49.17 42.34
CDX92058 Canola cytosol 32.78 38.94
CDY30325 Canola endoplasmic reticulum, plasma membrane 49.17 37.82
CDX83865 Canola cytosol 25.0 31.47
CDY41084 Canola cytosol 41.67 30.8
CDY17674 Canola cytosol 41.67 30.8
CDY40377 Canola cytosol 41.67 30.74
CDX77826 Canola cytosol 41.39 30.6
CDY66706 Canola cytosol 44.17 28.44
CDX70861 Canola cytosol 44.17 28.44
CDY13942 Canola cytosol 43.89 28.21
CDX92566 Canola cytosol 43.89 28.16
CDY26184 Canola cytosol 45.0 27.88
CDX68218 Canola mitochondrion 44.44 27.78
CDY11098 Canola mitochondrion 44.44 27.73
CDX81862 Canola cytosol 44.72 27.71
CDY60775 Canola cytosol 44.72 27.57
CDY21718 Canola cytosol 43.89 27.34
CDY60212 Canola cytosol 42.5 27.27
CDY25849 Canola cytosol 42.5 27.08
CDY49620 Canola cytosol, nucleus 43.89 26.69
CDX92190 Canola plastid 43.89 26.6
CDY45117 Canola cytosol 43.06 26.18
CDY63829 Canola peroxisome 41.39 26.09
CDY24091 Canola cytosol 42.5 26.06
CDX97596 Canola cytosol 42.5 25.8
CDX98489 Canola cytosol 42.22 25.38
CDX79842 Canola cytosol 43.33 25.28
CDY32347 Canola cytosol 41.94 25.04
CDY20079 Canola cytosol 41.94 25.04
CDY42817 Canola cytosol 43.33 24.3
CDX83515 Canola cytosol 43.06 24.03
CDY60195 Canola cytosol 43.33 23.74
Protein Annotations
Gene3D:1.10.510.10MapMan:13.4.4.1.4MapMan:18.4.3.6Gene3D:3.30.200.20GO:A0A078G0Q0UniProt:A0A078G0Q0
EnsemblPlants:CDY18876ProteinID:CDY18876ProteinID:CDY18876.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004713GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0018108GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00006063001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069
PIRSF:PIRSF000654ScanProsite:PS00109PFscan:PS50011PANTHER:PTHR24055PANTHER:PTHR24055:SF224InterPro:Prot_kinase_dom
SMART:SM00219SUPFAM:SSF56112InterPro:Tyr_kinase_ASInterPro:Tyr_kinase_cat_domUniParc:UPI0004EEC750:
Description
BnaC04g04740DBnaC04g04740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G0Q0]
Coordinates
chrLK032090:+:99047..100818
Molecular Weight (calculated)
41202.6 Da
IEP (calculated)
7.808
GRAVY (calculated)
-0.279
Length
360 amino acids
Sequence
(BLAST)
001: MSGESSSCST DHCIKVVPTH GGRYIQYNVY GQLFEVSRKY VPPIRPIGRG ACGIVCAAVN SVSGEKVAIK KIALREIKLL RHMDHENVIA IKDIVRPPQR
101: DVFNDVYIVY ELMDTDLQRV LHSKQTLSHD QCRFFVYQLL RGLKYVHSAN ILHRDLRPSN VLLNSKHELK IGDFGLARTT SDTDFMTEYV VTRWYRAPEL
201: LLNCSEYTAA IDIWSVGCIF GEIMTGQPLF PGKDYVHQLR LITELVGSPD NSSLGFLRSD NARRYVRQLP RYPKQEFAAR FPKVPPTAID LLERMLVFDP
301: NRRISVDEAL GHAYLSPHHD VAKEPVCPTP FSFDFEHPSC TEEHIKELIY KESVKFNPDH
Best Arabidopsis Sequence Match ( AT2G46070.3 )
(BLAST)
001: MDLVSSRDTL GDPSTSTKAL LLGFSRSRSD HCIIMSGESS SGSTEHCIKV VPTHGGRYVQ YNVYGQLFEV SRKYVPPIRP IGRGACGIVC AAVNSVTGEK
101: VAIKKIGNAF DNIIDAKRTL REIKLLRHMD HENVITIKDI VRPPQRDIFN DVYIVYELMD TDLQRILRSN QTLTSDQCRF LVYQLLRGLK YVHSANILHR
201: DLRPSNVLLN SKNELKIGDF GLARTTSDTD FMTEYVVTRW YRAPELLLNC SEYTAAIDIW SVGCILGEIM TGQPLFPGKD YVHQLRLITE LVGSPDNSSL
301: GFLRSDNARR YVRQLPRYPK QQFAARFPKM PTTAIDLLER MLVFDPNRRI SVDEALGHAY LSPHHDVAKE PVCSTPFSFD FEHPSCTEEH IKELIYKESV
401: KFNPDH
Arabidopsis Description
ATMPK12MPK12 [Source:UniProtKB/TrEMBL;Acc:A0A178VX75]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.