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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
cytosol: 23758924
nucleus: 23758924
gfp PMID: 23758924 doi
W Liang, B Yang, BJ Yu, Z Zhou, C Li, M Jia, Y Sun, Y Zhang, F Wu, H Zhang, B Wang, MK Deyholos, YQ Jiang
State Key Laboratory of Crop Stress Biology for Arid Areas and College of Life Sciences, Northwest A & F University, Yangling, Shaanxi 712100, China.
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G43790.1 CDY18219 AT1G04330.1 21798944
AT2G43790.1 CDY32540 AT1G04330.1 21798944
AT2G43790.1 CDY60670 AT1G04330.1 21798944
AT2G43790.1 CDY00369 AT1G21326.1 24750137
AT2G43790.1 CDY04618 AT1G21326.1 24750137
AT2G43790.1 CDY50839 AT1G21326.1 24750137
AT2G43790.1 CDY61066 AT1G21326.1 24750137
AT2G43790.1 CDX90141 AT1G28280.1 24750137
AT2G43790.1 CDX94599 AT1G28280.1 24750137
AT2G43790.1 CDY15683 AT1G28280.1 24750137
AT2G43790.1 CDY35728 AT1G28280.1 24750137
AT2G43790.1 CDX90141 AT1G28280.1 24750137
AT2G43790.1 CDX94599 AT1G28280.1 24750137
AT2G43790.1 CDY15683 AT1G28280.1 24750137
AT2G43790.1 CDY35728 AT1G28280.1 24750137
AT2G43790.1 CDX87830 AT1G51660.1 19513235
AT2G43790.1 CDY43920 AT1G51660.1 19513235
AT2G43790.1 CDY46547 AT1G51660.1 19513235
AT2G43790.1 CDY52951 AT1G51660.1 19513235
AT2G43790.1 CDX87830 AT1G51660.1 23115249
AT2G43790.1 CDY43920 AT1G51660.1 23115249
AT2G43790.1 CDY46547 AT1G51660.1 23115249
AT2G43790.1 CDY52951 AT1G51660.1 23115249
AT2G43790.1 CDX68224 AT1G73500.1 19513235
AT2G43790.1 CDX82067 AT1G73500.1 19513235
AT2G43790.1 CDY11103 AT1G73500.1 19513235
AT2G43790.1 CDY71921 AT1G73500.1 19513235
AT2G43790.1 CDX79256 AT1G78310.1 24750137
AT2G43790.1 CDX87454 AT1G78310.1 24750137
AT2G43790.1 CDX88437 AT1G78310.1 24750137
AT2G43790.1 CDY14617 AT1G78310.1 24750137
AT2G43790.1 CDY26860 AT1G78310.1 24750137
AT2G43790.1 CDX67947 AT1G80450.1 24750137
AT2G43790.1 CDX79386 AT1G80450.1 24750137
AT2G43790.1 CDX87310 AT1G80450.1 24750137
AT2G43790.1 CDY39978 AT1G80450.1 24750137
AT2G43790.1 CDX84848 AT2G30250.1 15990873
AT2G43790.1 CDX97834 AT2G30250.1 15990873
AT2G43790.1 CDY02051 AT2G30250.1 15990873
AT2G43790.1 CDY10720 AT2G30250.1 15990873
AT2G43790.1 CDY24017 AT2G30250.1 15990873
AT2G43790.1 CDY29685 AT2G30250.1 15990873
AT2G43790.1 CDY17201 AT2G33780.1 24750137
AT2G43790.1 CDY27942 AT2G33780.1 24750137
AT2G43790.1 CDY37691 AT2G33780.1 24750137
AT2G43790.1 CDX79596 AT2G35230.1 24750137
AT2G43790.1 CDX84225 AT2G35230.1 24750137
AT2G43790.1 CDX84616 AT2G35230.1 24750137
AT2G43790.1 CDY31674 AT2G35230.1 24750137
AT2G43790.1 CDX79952 AT2G41180.1 24750137
AT2G43790.1 CDY22506 AT2G41180.1 24750137
AT2G43790.1 CDY23869 AT2G41180.1 24750137
AT2G43790.1 CDY35426 AT2G41180.1 24750137
AT2G43790.1 CDX79801 AT2G43790.1 19513235
AT2G43790.1 CDX83459 AT2G43790.1 19513235
AT2G43790.1 CDY17911 AT2G43790.1 19513235
AT2G43790.1 CDY44256 AT2G43790.1 19513235
AT2G43790.1 CDX97648 AT3G15300.1 24750137
AT2G43790.1 CDX98545 AT3G15300.1 24750137
AT2G43790.1 CDY20126 AT3G15300.1 24750137
AT2G43790.1 CDY32307 AT3G15300.1 24750137
AT2G43790.1 CDX82209 AT3G21220.1 19513235
AT2G43790.1 CDX82210 AT3G21220.1 19513235
AT2G43790.1 CDY27532 AT3G21220.1 19513235
AT2G43790.1 CDY32414 AT3G21220.1 19513235
AT2G43790.1 CDY32415 AT3G21220.1 19513235
AT2G43790.1 CDY37306 AT3G21220.1 19513235
AT2G43790.1 CDX72115 AT3G56710.1 24750137
AT2G43790.1 CDX76008 AT3G56710.1 24750137
AT2G43790.1 CDX76009 AT3G56710.1 24750137
AT2G43790.1 CDY32029 AT3G56710.1 24750137
AT2G43790.1 CDY47371 AT3G56710.1 24750137
AT2G43790.1 CDY68642 AT3G56710.1 24750137
AT2G43790.1 CDX76570 AT4G17490.1 23300166
AT2G43790.1 CDY27922 AT4G17490.1 23300166
AT2G43790.1 CDY38399 AT4G17490.1 23300166
AT2G43790.1 CDY64966 AT4G17490.1 23300166
AT2G43790.1 CDX76570 AT4G17490.1 23300166
AT2G43790.1 CDY27922 AT4G17490.1 23300166
AT2G43790.1 CDY38399 AT4G17490.1 23300166
AT2G43790.1 CDY64966 AT4G17490.1 23300166
AT2G43790.1 CDX68588 AT4G29810.2 23115249
AT2G43790.1 CDY43527 AT4G29810.2 23115249
AT2G43790.1 CDX77690 AT5G46780.1 24750137
AT2G43790.1 CDX87678 AT5G46780.1 24750137
AT2G43790.1 CDY37148 AT5G46780.1 24750137
AT2G43790.1 CDY58504 AT5G46780.1 24750137
AT2G43790.1 CDX77690 AT5G46780.1 24750137
AT2G43790.1 CDX87678 AT5G46780.1 24750137
AT2G43790.1 CDY37148 AT5G46780.1 24750137
AT2G43790.1 CDY58504 AT5G46780.1 24750137
AT2G43790.1 CDX96246 AT5G53830.1 24750137
AT2G43790.1 CDX96247 AT5G53830.1 24750137
AT2G43790.1 CDY14349 AT5G53830.1 24750137
AT2G43790.1 CDY65903 AT5G53830.1 24750137
AT2G43790.1 CDX96246 AT5G53830.1 24750137
AT2G43790.1 CDX96247 AT5G53830.1 24750137
AT2G43790.1 CDY14349 AT5G53830.1 24750137
AT2G43790.1 CDY65903 AT5G53830.1 24750137
AT2G43790.1 CDX88578 AT5G56580.1 19513235
AT2G43790.1 CDY11913 AT5G56580.1 19513235
AT2G43790.1 CDY32868 AT5G56580.1 19513235
AT2G43790.1 CDY39283 AT5G56580.1 19513235
AT2G43790.1 CDY64969 AT5G56580.1 19513235
AT2G43790.1 CDY02129 AT5G61600.1 19416906
AT2G43790.1 CDY23052 AT5G61600.1 19416906
AT2G43790.1 CDY42869 AT5G61600.1 19416906
AT2G43790.1 CDY67760 AT5G61600.1 19416906
AT2G43790.1 CDY02129 AT5G61600.1 23115249
AT2G43790.1 CDY23052 AT5G61600.1 23115249
AT2G43790.1 CDY42869 AT5G61600.1 23115249
AT2G43790.1 CDY67760 AT5G61600.1 23115249
AT2G43790.1 CDX84395 AT5G63310.1 12506203
AT2G43790.1 CDY41513 AT5G63310.1 12506203
AT2G43790.1 CDY48138 AT5G63310.1 12506203
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000326.1-P Field mustard cytosol 99.49 99.49
CDY44256 Canola cytosol 98.23 98.23
AT2G43790.1 Thale cress cytosol 94.94 94.94
CDY17911 Canola cytosol 93.92 94.64
CDX79801 Canola cytosol 93.67 94.39
KRH71277 Soybean nucleus 87.09 87.98
Solyc08g014420.2.1 Tomato cytosol 86.84 87.06
VIT_05s0094g00900.t01 Wine grape cytosol 87.34 86.68
HORVU7Hr1G023760.2 Barley cytosol 80.25 86.38
Solyc12g019460.1.1 Tomato cytosol 86.08 85.86
GSMUA_Achr2P19320_001 Banana cytosol 82.03 85.49
GSMUA_Achr10P... Banana cytosol 82.28 85.08
GSMUA_Achr5P06640_001 Banana cytosol 81.77 84.56
Zm00001d045310_P003 Maize cytosol 83.8 83.17
Zm00001d036215_P003 Maize cytosol, extracellular 83.54 82.91
TraesCS7B01G009200.1 Wheat nucleus 82.03 82.44
Os06t0154500-01 Rice plasma membrane 83.04 82.41
TraesCS7D01G106400.1 Wheat cytosol 81.52 81.93
EER89222 Sorghum cytosol 83.29 81.84
TraesCS7A01G111300.1 Wheat golgi 81.77 81.57
KRH50176 Soybean cytosol, nucleus 86.33 78.75
CDX99153 Canola cytosol 64.81 76.88
CDX86029 Canola cytosol 69.87 74.59
CDX91889 Canola cytosol 65.57 69.44
CDX74352 Canola cytosol 65.57 69.44
CDY13253 Canola cytosol 62.78 66.49
CDY45782 Canola cytosol 63.54 64.19
CDX89033 Canola cytosol 63.04 63.85
CDY22716 Canola cytosol 59.75 63.61
CDY06283 Canola cytosol 59.75 63.61
CDX89034 Canola cytosol 62.78 62.94
CDX74788 Canola cytosol 56.46 61.94
CDY18876 Canola cytosol 55.95 61.39
CDY37087 Canola cytosol 55.7 61.11
CDY27334 Canola cytosol 55.44 60.83
CDY05979 Canola cytosol 61.27 60.5
CDY05980 Canola cytosol 59.49 60.41
CDX71876 Canola cytosol 59.24 58.65
CDX93447 Canola cytosol 50.38 53.93
CDX67813 Canola cytosol 61.27 53.66
CDX94915 Canola cytosol 49.87 53.39
CDY44551 Canola cytosol 49.87 53.24
CDX86793 Canola cytosol 62.78 52.99
CDY46308 Canola cytosol 49.37 52.99
CDY45885 Canola cytosol 49.37 52.7
CDX98395 Canola cytosol 61.01 50.95
CDY53276 Canola cytosol 48.61 45.93
CDY30325 Canola endoplasmic reticulum, plasma membrane 48.61 41.03
CDX92058 Canola cytosol 30.89 40.26
CDX83865 Canola cytosol 26.33 36.36
CDX77826 Canola cytosol 41.27 33.47
CDY17674 Canola cytosol 41.27 33.47
CDY41084 Canola cytosol 41.27 33.47
CDY40377 Canola cytosol 41.27 33.4
CDY66706 Canola cytosol 45.32 32.02
CDX70861 Canola cytosol 45.32 32.02
CDY13942 Canola cytosol 45.32 31.96
CDX92566 Canola cytosol 45.32 31.91
CDY26184 Canola cytosol 44.05 29.95
CDY21718 Canola cytosol 43.8 29.93
CDY60775 Canola cytosol 44.05 29.79
CDX81862 Canola cytosol 43.8 29.78
CDY11098 Canola mitochondrion 43.04 29.46
CDY49620 Canola cytosol, nucleus 44.05 29.39
CDX68218 Canola mitochondrion 42.78 29.34
CDX92190 Canola plastid 44.05 29.29
CDX97596 Canola cytosol 43.29 28.84
CDY24091 Canola cytosol 42.78 28.79
CDX98489 Canola cytosol 43.54 28.71
CDY60212 Canola cytosol 40.76 28.7
CDY32347 Canola cytosol 43.8 28.69
CDX79842 Canola cytosol 44.81 28.69
CDY25849 Canola cytosol 41.01 28.67
CDY63829 Canola peroxisome 41.27 28.55
CDY20079 Canola cytosol 43.54 28.52
CDY45117 Canola cytosol 42.28 28.21
CDY42817 Canola cytosol 44.3 27.26
CDX83515 Canola cytosol 44.3 27.13
CDY60195 Canola cytosol 44.81 26.94
Protein Annotations
KEGG:04150+2.7.11.24Gene3D:1.10.510.10MapMan:13.4.4.1.4MapMan:18.4.3.6Gene3D:3.30.200.20GO:A0A078D553
EnsemblPlants:CDX83459ProteinID:CDX83459ProteinID:CDX83459.1GO:GO:0000165GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0004707GO:GO:0004871GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006464GO:GO:0006468
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00139037001InterPro:IPR000719InterPro:Kinase-like_dom_sf
InterPro:MAP_kinase_CSPFAM:PF00069PIRSF:PIRSF000615ScanProsite:PS00107ScanProsite:PS00108ScanProsite:PS01351
PFscan:PS50011PANTHER:PTHR24055PANTHER:PTHR24055:SF214InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE1C27:::
Description
BnaA03g20470D
Coordinates
chrLK031832:-:1635318..1638461
Molecular Weight (calculated)
44908.9 Da
IEP (calculated)
5.059
GRAVY (calculated)
-0.247
Length
395 amino acids
Sequence
(BLAST)
001: MDGGTGQPAA DTEMSEATGG AAPSQPMPGI ENIPATLSHG GMFIQYNIFG NIFEVTAKYS PPIMPIGKGA YGIVCSAMNS ETNESVAIKK IANAFDNKID
101: AKRTLREIKL LRHMDHENIV AIRDIIPPPL RTAFNDVYIA YELMDTDLHQ IIRSNQGLSE EHCQYFLYQI LRGLKYIHSA NVLHRDLKPS NLLLNANCDL
201: KICDFGLARV NSESDFMTEY VVTRWYRAPE LLLNSSDYTA AIDVWSVGCI FMELMDRKPL FPGRDHVHQL RLLMELIGTP SEQEVEFLNE NAKRYIRQLP
301: PYPRQSITDK FPNVHPLAID LIEKMLTFDP RRRITVLDAL AHPYLNSLHD ISDEPECTIP FNFDFEQHAL SEEQMKELIY REALAFNPEY QTAIA
Best Arabidopsis Sequence Match ( AT2G43790.1 )
(BLAST)
001: MDGGSGQPAA DTEMTEAPGG FPAAAPSPQM PGIENIPATL SHGGRFIQYN IFGNIFEVTA KYKPPIMPIG KGAYGIVCSA MNSETNESVA IKKIANAFDN
101: KIDAKRTLRE IKLLRHMDHE NIVAIRDIIP PPLRNAFNDV YIAYELMDTD LHQIIRSNQA LSEEHCQYFL YQILRGLKYI HSANVLHRDL KPSNLLLNAN
201: CDLKICDFGL ARVTSESDFM TEYVVTRWYR APELLLNSSD YTAAIDVWSV GCIFMELMDR KPLFPGRDHV HQLRLLMELI GTPSEEELEF LNENAKRYIR
301: QLPPYPRQSI TDKFPTVHPL AIDLIEKMLT FDPRRRITVL DALAHPYLNS LHDISDEPEC TIPFNFDFEN HALSEEQMKE LIYREALAFN PEYQQ
Arabidopsis Description
MPK6Mitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A178VTX8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.