Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67947 | Canola | nucleus | 73.26 | 76.83 |
| CDY39978 | Canola | nucleus | 69.19 | 71.26 |
| CDX87310 | Canola | nucleus | 68.6 | 70.66 |
| AT1G80450.1 | Thale cress | nucleus, plastid | 61.63 | 59.89 |
| CDY37597 | Canola | nucleus | 56.98 | 59.76 |
| PGSC0003DMT400036669 | Potato | nucleus, plastid | 44.19 | 45.78 |
| Solyc03g117500.1.1 | Tomato | plastid | 43.6 | 44.64 |
| CDY38669 | Canola | nucleus | 49.42 | 43.81 |
| KRH47420 | Soybean | plastid | 41.28 | 36.79 |
| KRH44484 | Soybean | plastid | 40.12 | 35.57 |
| VIT_09s0002g07540.t01 | Wine grape | plastid | 36.63 | 33.87 |
| CDX69949 | Canola | plastid | 26.74 | 30.67 |
| CDY40742 | Canola | nucleus | 23.26 | 28.57 |
| GSMUA_Achr3P19850_001 | Banana | nucleus | 33.72 | 28.16 |
| CDY37691 | Canola | plastid | 31.4 | 27.14 |
| CDX96246 | Canola | nucleus | 31.98 | 25.94 |
| CDY65903 | Canola | nucleus | 31.98 | 25.82 |
| CDY17201 | Canola | plastid | 29.65 | 25.5 |
| CDX90141 | Canola | nucleus, plastid | 33.14 | 25.11 |
| CDY35728 | Canola | nucleus, plastid | 33.72 | 24.89 |
| CDY27942 | Canola | nucleus | 28.49 | 24.5 |
| CDX96247 | Canola | nucleus | 34.3 | 24.38 |
| CDX97648 | Canola | plastid | 31.4 | 24.32 |
| CDY62120 | Canola | mitochondrion, nucleus | 27.91 | 24.24 |
| CDY20126 | Canola | nucleus, plastid | 30.23 | 24.07 |
| CDY32307 | Canola | nucleus | 30.81 | 23.87 |
| CDY14349 | Canola | nucleus | 33.72 | 23.87 |
| CDY15683 | Canola | nucleus, plastid | 33.14 | 23.36 |
| CDX94599 | Canola | nucleus, plastid | 33.14 | 22.98 |
| CDX98545 | Canola | plastid | 24.42 | 21.43 |
| CDX81107 | Canola | nucleus | 24.42 | 19.72 |
| CDY60233 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 25.58 | 18.41 |
Protein Annotations
| EnsemblPlants:CDX79386 | EnsemblPlantsGene:GSBRNA2T00132092001 | InterPro:VQ | PANTHER:PTHR33402 | PANTHER:PTHR33402:SF3 | PFAM:PF05678 |
| ProteinID:CDX79386 | ProteinID:CDX79386.1 | SEG:seg | UniParc:UPI0004EC20CB | MapMan:35.1 | : |
Description
BnaC06g19170D
Coordinates
chrLK031817:+:1787241..1787759
Molecular Weight (calculated)
19580.1 Da
IEP (calculated)
10.126
GRAVY (calculated)
-0.865
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHQNHHQLP NYATARNTMF VQADPSNFRN IVQKLTGAPP ELSAVSAAQR KLPLTPKKPA FKLHERRQTS KKMELKINNT TDDSLSHFNR GFLVSPVSHL
101: DPFWMRVSPH SAHEYPHASP DNKEQKAIAE KGFYFLPSPR SGDEPAPELL PLFPLRSLNA TNQRTEEDYR NS
101: DPFWMRVSPH SAHEYPHASP DNKEQKAIAE KGFYFLPSPR SGDEPAPELL PLFPLRSLNA TNQRTEEDYR NS
001: MSHQQPPSYA TEPNTMFVQA DPSNFRNIVQ KLTGAPPDIS SSSFSAVSAA HQKLPLTPKK PAFKLHERRQ SSKKMELKVN NITNPNDAFS HFHRGFLVSP
101: VSHLDPFWAR VSPHSAREEH HAQPDKEEQK AIAEKGFYFL PSPRSGSEPA PELLPLFPLR SPNGTNHRIH EDNHRDS
101: VSHLDPFWAR VSPHSAREEH HAQPDKEEQK AIAEKGFYFL PSPRSGSEPA PELLPLFPLR SPNGTNHRIH EDNHRDS
Arabidopsis Description
VQ11VQ motif-containing protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.