Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009343.1-P | Field mustard | cytosol, plastid | 33.33 | 49.02 |
| CDY62120 | Canola | mitochondrion, nucleus | 62.67 | 47.47 |
| CDY40742 | Canola | nucleus | 42.67 | 45.71 |
| CDX81107 | Canola | nucleus | 64.67 | 45.54 |
| CDY60233 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 65.33 | 41.0 |
| KRH59700 | Soybean | nucleus | 49.33 | 39.78 |
| KRH41023 | Soybean | nucleus | 44.67 | 38.51 |
| PGSC0003DMT400030219 | Potato | cytosol | 36.0 | 36.99 |
| Solyc12g088490.1.1 | Tomato | cytosol | 36.0 | 33.33 |
| CDX87310 | Canola | nucleus | 32.0 | 28.74 |
| CDY39978 | Canola | nucleus | 31.33 | 28.14 |
| CDX67947 | Canola | nucleus | 30.67 | 28.05 |
| CDX79386 | Canola | plastid | 30.67 | 26.74 |
| CDY37691 | Canola | plastid | 35.33 | 26.63 |
| CDX96246 | Canola | nucleus | 36.67 | 25.94 |
| CDX97648 | Canola | plastid | 38.0 | 25.68 |
| CDY37597 | Canola | nucleus | 28.0 | 25.61 |
| CDY20126 | Canola | nucleus, plastid | 36.67 | 25.46 |
| CDY35728 | Canola | nucleus, plastid | 38.67 | 24.89 |
| CDY65903 | Canola | nucleus | 35.33 | 24.88 |
| CDX90141 | Canola | nucleus, plastid | 37.33 | 24.67 |
| CDY27942 | Canola | nucleus | 32.67 | 24.5 |
| CDY17201 | Canola | plastid | 32.0 | 24.0 |
| CDY32307 | Canola | nucleus | 35.33 | 23.87 |
| CDX96247 | Canola | nucleus | 36.67 | 22.73 |
| CDY15683 | Canola | nucleus, plastid | 36.67 | 22.54 |
| CDX94599 | Canola | nucleus, plastid | 36.67 | 22.18 |
| CDY14349 | Canola | nucleus | 35.33 | 21.81 |
| CDY38669 | Canola | nucleus | 27.33 | 21.13 |
| CDX98545 | Canola | plastid | 25.33 | 19.39 |
Protein Annotations
| EnsemblPlants:CDX69949 | EnsemblPlantsGene:GSBRNA2T00136030001 | InterPro:VQ | PANTHER:PTHR33402 | PANTHER:PTHR33402:SF2 | PFAM:PF05678 |
| ProteinID:CDX69949 | ProteinID:CDX69949.1 | SEG:seg | UniParc:UPI0004EEE5B2 | MapMan:35.1 | : |
Description
BnaA10g22980D
Coordinates
chrLK031790:-:2446299..2446959
Molecular Weight (calculated)
16622.6 Da
IEP (calculated)
10.079
GRAVY (calculated)
-0.977
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNQGSQNVA TCKPVTTFVH TDTNTFREIV QRLTGPSENN NAATVPPEAT SIKTATQKKP TTSKLHERRQ CMMRPKLEIV KPPLSFKPTS TTPSSKSGDK
101: ADPDTGEEEE KAIKERRFYL HPSPRSKPGY TEPELLTLFP LTSPNSSGRP
101: ADPDTGEEEE KAIKERRFYL HPSPRSKPGY TEPELLTLFP LTSPNSSGRP
001: MNSKGSQNVA TTCKPVTTFV QTDTNTFREI VQRLTGPTEN NAAAATPEAT VIKTAIQKRP TSKLHERRQC MRPKLEIVKP PLSFKPTGTT PSSKSGNTNL
101: LTSPVGTPSS LFSNLSLIEG EPDSCTTNIE EEEKAIKERR FYLHPSPRSK PGYTEPELLT LFPLTSPNSS GKP
101: LTSPVGTPSS LFSNLSLIEG EPDSCTTNIE EEEKAIKERR FYLHPSPRSK PGYTEPELLT LFPLTSPNSS GKP
Arabidopsis Description
VQ31VQ motif-containing protein 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP0]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.