Factsheet for Bra009343.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69949	Canola	plastid	49.02	33.33
CDY62120	Canola	mitochondrion, nucleus	64.71	33.33
Bra005995.1-P	Field mustard	cytosol, nucleus, plastid	51.96	30.46
Bra010885.1-P	Field mustard	nucleus, plastid	40.2	25.31
KRH59700	Soybean	nucleus	46.08	25.27
KRH41023	Soybean	nucleus	41.18	24.14
PGSC0003DMT400030219	Potato	cytosol	31.37	21.92
Solyc12g088490.1.1	Tomato	cytosol	32.35	20.37
Bra035182.1-P	Field mustard	nucleus	32.35	19.76
Bra005472.1-P	Field mustard	mitochondrion, plastid	34.31	19.02
Bra008473.1-P	Field mustard	nucleus	27.45	17.07
Bra030082.1-P	Field mustard	nucleus, plastid	40.2	16.8
Bra003566.1-P	Field mustard	nucleus	28.43	16.76
Bra021096.1-P	Field mustard	nucleus, plastid	34.31	16.2
Bra027262.1-P	Field mustard	plastid	35.29	16.0
Bra022675.1-P	Field mustard	nucleus	36.27	15.35
Bra003032.1-P	Field mustard	nucleus	31.37	14.1

Protein Annotations

EnsemblPlants:Bra009343.1	EnsemblPlants:Bra009343.1-P	EnsemblPlantsGene:Bra009343	PANTHER:PTHR33402	PANTHER:PTHR33402:SF2	SEG:seg
UniParc:UPI0002543D5A	UniProt:M4CYP6	MapMan:35.2	:	:	:

Description

AT5G08480 (E=4e-027) | VQ motif-containing protein

Coordinates

chrA10:+:16275664..16275972

Molecular Weight (calculated)

11136.2 Da

IEP (calculated)

9.013

GRAVY (calculated)

-0.695

Length

102 amino acids

Sequence
(BLAST)

001: MMRPKLEIVK PPLSFKPTST TPSSKSGNTN LLASPVGTPS SLLSNLSLIE GDKADPDTEE EEKAIKERRF YLHPSPRSKP GYTEPELLTL FPLTSPNSSG
101: RP

Best Arabidopsis Sequence Match ( AT5G08480.3 )
(BLAST)

001: MNSKGSQNVA TTCKPVTTFV QTDTNTFREI VQRLTGPTEN NAAAATPEAT VIKTAIQKRP TSKLHERRQC MRPKLEIVKP PLSFKPTGTT PSSKSGNTNL
101: LTSPVGTPSS LFSNLSLIEG EPDSCTTNIE EEEKAIKERR FYLHPSPRSK PGYTEPELLT LFPLTSPNSS GKP

Arabidopsis Description

VQ31VQ motif-containing protein 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP0]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.