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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G08480.2 Thale cress cytosol, plastid 63.22 63.58
Bra009343.1-P Field mustard cytosol, plastid 30.46 51.96
CDX81107 Canola nucleus 59.2 48.36
KRH41023 Soybean nucleus 45.4 45.4
CDY60233 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 59.77 43.51
KRH59700 Soybean nucleus 44.25 41.4
PGSC0003DMT400030219 Potato cytosol 31.61 37.67
Solyc12g088490.1.1 Tomato cytosol 31.61 33.95
Bra035182.1-P Field mustard nucleus 25.29 26.35
Bra005472.1-P Field mustard mitochondrion, plastid 27.59 26.09
Bra010885.1-P Field mustard nucleus, plastid 24.14 25.93
Bra008473.1-P Field mustard nucleus 24.14 25.61
Bra003566.1-P Field mustard nucleus 25.29 25.43
Bra021096.1-P Field mustard nucleus, plastid 31.03 25.0
Bra027262.1-P Field mustard plastid 31.03 24.0
Bra030082.1-P Field mustard nucleus, plastid 31.03 22.13
Bra003032.1-P Field mustard nucleus 28.74 22.03
Bra022675.1-P Field mustard nucleus 29.89 21.58
Protein Annotations
EnsemblPlants:Bra005995.1EnsemblPlants:Bra005995.1-PEnsemblPlantsGene:Bra005995InterPro:VQPANTHER:PTHR33402PANTHER:PTHR33402:SF2
PFAM:PF05678SEG:segUniParc:UPI000253F7ACUniProt:M4CP57MapMan:35.1:
Description
AT5G08480 (E=8e-062) | VQ motif-containing protein
Coordinates
chrA03:+:1534982..1535506
Molecular Weight (calculated)
19114.7 Da
IEP (calculated)
9.879
GRAVY (calculated)
-0.673
Length
174 amino acids
Sequence
(BLAST)
001: MNNQGSQNVA TCKPVTTFVH TDTDTFREVV QRLTGPSESN AAAIPEATVI KTAIQRKPTS KLHERRQCMR PKLEIVKPPL SFKPTGKKPL SKSGITNLLT
101: DPLSTSSSLV SNLSLIEGDK ADPDSCTTNN EEEERAIKER RFYLHPSPRS KPGYTEPALL TLFPLTSPNS SGRP
Best Arabidopsis Sequence Match ( AT5G08480.3 )
(BLAST)
001: MNSKGSQNVA TTCKPVTTFV QTDTNTFREI VQRLTGPTEN NAAAATPEAT VIKTAIQKRP TSKLHERRQC MRPKLEIVKP PLSFKPTGTT PSSKSGNTNL
101: LTSPVGTPSS LFSNLSLIEG EPDSCTTNIE EEEKAIKERR FYLHPSPRSK PGYTEPELLT LFPLTSPNSS GKP
Arabidopsis Description
VQ31VQ motif-containing protein 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP0]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.