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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 6
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97648 Canola plastid 96.44 97.75
Bra021096.1-P Field mustard nucleus, plastid 81.78 85.19
AT3G15300.1 Thale cress nucleus, plastid 76.0 78.08
CDX98545 Canola plastid 63.56 72.96
VIT_19s0014g02490.t01 Wine grape nucleus, plastid 51.11 54.76
KRH27258 Soybean nucleus, plastid 56.0 51.22
Bra010885.1-P Field mustard nucleus, plastid 36.44 50.62
GSMUA_Achr8P27670_001 Banana plastid 24.44 50.46
KRH22072 Soybean nucleus, plastid 55.56 50.2
KRH38333 Soybean plastid 44.44 50.0
KRH55250 Soybean nucleus, plastid 53.78 49.59
KRH26132 Soybean nucleus, plastid 53.33 48.39
PGSC0003DMT400097260 Potato nucleus, plastid 49.33 48.26
Solyc07g063070.1.1 Tomato nucleus, plastid 49.78 48.07
Bra003032.1-P Field mustard nucleus 48.0 47.58
Bra022675.1-P Field mustard nucleus 48.0 44.81
Bra030082.1-P Field mustard nucleus, plastid 45.78 42.21
EES03601 Sorghum nucleus, plastid 43.56 41.35
TraesCS3B01G307300.1 Wheat nucleus, plastid 41.78 40.69
Os01t0201250-00 Rice plastid 38.22 40.57
GSMUA_Achr4P10440_001 Banana nucleus 37.33 39.81
HORVU3Hr1G026840.1 Barley plastid 37.33 39.62
GSMUA_AchrUn_... Banana nucleus 43.11 39.59
TraesCS3A01G313700.1 Wheat plastid 36.89 39.52
TraesCS3B01G158200.1 Wheat plastid 36.89 39.52
TraesCS3D01G140600.1 Wheat plastid 36.89 39.52
Os01t0747800-01 Rice nucleus 40.44 39.39
GSMUA_Achr10P... Banana cytosol, mitochondrion, nucleus, plastid 41.33 39.08
TraesCS3A01G273600.1 Wheat nucleus, plastid 40.89 38.66
EES00109 Sorghum cytosol, nucleus, plasma membrane, plastid 37.33 38.36
TraesCS3D01G272900.1 Wheat nucleus, plastid 40.44 38.24
Zm00001d008878_P001 Maize cytosol 36.0 38.21
GSMUA_Achr7P13760_001 Banana nucleus 41.78 37.9
Zm00001d038810_P001 Maize plastid 36.44 37.79
Bra005472.1-P Field mustard mitochondrion, plastid 30.67 37.5
Zm00001d010759_P001 Maize plastid 36.44 37.27
TraesCS1A01G338700.1 Wheat plastid 39.56 37.08
GSMUA_Achr4P02580_001 Banana nucleus 42.67 37.07
TraesCS1D01G340900.1 Wheat plastid 39.56 36.78
GSMUA_AchrUn_... Banana nucleus 41.33 36.76
Zm00001d039428_P001 Maize plastid 35.11 36.74
TraesCS1B01G351200.1 Wheat plastid 38.67 36.71
Zm00001d043450_P001 Maize nucleus, plastid 40.44 36.26
GSMUA_Achr9P05800_001 Banana nucleus 40.89 35.94
Bra009343.1-P Field mustard cytosol, plastid 16.0 35.29
Os05t0519000-00 Rice plastid 39.56 32.96
Bra035182.1-P Field mustard nucleus 24.0 32.34
Bra008473.1-P Field mustard nucleus 23.56 32.32
EES18519 Sorghum plastid 35.56 31.62
HORVU1Hr1G076390.1 Barley plastid 38.22 31.39
Bra003566.1-P Field mustard nucleus 24.0 31.21
Bra005995.1-P Field mustard cytosol, nucleus, plastid 24.0 31.03
HORVU3Hr1G071320.1 Barley plastid 37.33 28.47
Protein Annotations
EnsemblPlants:Bra027262.1EnsemblPlants:Bra027262.1-PEnsemblPlantsGene:Bra027262InterPro:VQPANTHER:PTHR33402PANTHER:PTHR33402:SF6
PFAM:PF05678SEG:segUniParc:UPI0002547B10UniProt:M4EEQ0MapMan:35.1:
Description
AT3G15300 (E=1e-082) | VQ motif-containing protein
Coordinates
chrA05:+:20004787..20005464
Molecular Weight (calculated)
24214.3 Da
IEP (calculated)
9.955
GRAVY (calculated)
-0.720
Length
225 amino acids
Sequence
(BLAST)
001: METTTKPNQS STTSSSASSS IINGSLHHHI ITRSDHYPTT FVQADTSTFK QVVQMLTGTS SPRSPDSPRP PPSPSGKSTF VIPPVKTTQP KKHSGNKLYE
101: RRSNNSSLKN SLMINTLMVG GGNGAGSPRF SPRNQEILSP SCLDFPKLAL NSPVTPLKHG GDGNDGDPFD RMSPLSEEER AISEKGYYLH RSPISTPRES
201: EPQLLPLFPV TSPRVSAASP DTSTS
Best Arabidopsis Sequence Match ( AT3G15300.1 )
(BLAST)
001: MEISTNPPSS SSSSVSSSII NGSLHHHIIT RSDHYPTTFV QADSSSFKQV VQMLTGSSSP RSPDSPRPPT TPSGKGNFVI PPIKTAQPKK HSGNKLYERR
101: SHGGFNNNLK NSLMINTLMI GGGGAGSPRF SPRNQEILSP SCLDFPKLAL NSPVTPLKQG TNGNEGDPFD KMSPLSEEER GIADKGYYLH RSPISTPRDS
201: EPQLLPLFPV TSPRLSPEM
Arabidopsis Description
VQ19VQ motif-containing protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDZ1]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.