Factsheet for Zm00001d010759_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038810_P001	Maize	plastid	60.0	60.83
TraesCS1A01G338700.1	Wheat	plastid	64.09	58.75
TraesCS1B01G351200.1	Wheat	plastid	62.73	58.23
TraesCS1D01G340900.1	Wheat	plastid	63.18	57.44
EES18519	Sorghum	plastid	65.91	57.31
Zm00001d043450_P001	Maize	nucleus, plastid	58.18	51.0
HORVU1Hr1G076390.1	Barley	plastid	59.09	47.45
Os05t0519000-00	Rice	plastid	55.91	45.56
VIT_19s0014g02490.t01	Wine grape	nucleus, plastid	42.73	44.76
KRH10893	Soybean	nucleus	40.0	44.22
GSMUA_Achr4P10440_001	Banana	nucleus	42.27	44.08
Zm00001d008878_P001	Maize	cytosol	40.91	42.45
Zm00001d039428_P001	Maize	plastid	41.36	42.33
CDX90141	Canola	nucleus, plastid	43.18	41.85
Bra010885.1-P	Field mustard	nucleus, plastid	30.45	41.36
VIT_00s0527g00020.t01	Wine grape	cytosol, nucleus, plastid	30.45	40.85
Solyc07g063070.1.1	Tomato	nucleus, plastid	43.18	40.77
CDY37691	Canola	plastid	36.82	40.7
PGSC0003DMT400097260	Potato	nucleus, plastid	42.27	40.43
CDY35728	Canola	nucleus, plastid	42.73	40.34
CDY65903	Canola	nucleus	38.18	39.44
Bra021096.1-P	Field mustard	nucleus, plastid	38.64	39.35
CDX96246	Canola	nucleus	37.73	39.15
CDY20126	Canola	nucleus, plastid	37.73	38.43
Solyc02g078030.1.1	Tomato	nucleus, plastid	45.91	38.4
AT3G15300.1	Thale cress	nucleus, plastid	37.73	37.9
CDY32307	Canola	nucleus	38.18	37.84
PGSC0003DMT400076377	Potato	nucleus	45.0	37.79
CDY15683	Canola	nucleus, plastid	41.82	37.7
Bra030082.1-P	Field mustard	nucleus, plastid	41.82	37.7
AT1G28280.1	Thale cress	nucleus, plastid	42.27	37.65
Bra003032.1-P	Field mustard	nucleus	38.64	37.44
KRH55250	Soybean	nucleus, plastid	41.36	37.3
KRH38333	Soybean	plastid	33.64	37.0
KRH27258	Soybean	nucleus, plastid	41.36	36.99
KRH22072	Soybean	nucleus, plastid	41.82	36.95
CDX97648	Canola	plastid	37.27	36.94
CDX94599	Canola	nucleus, plastid	41.36	36.69
KRH26132	Soybean	nucleus, plastid	41.36	36.69
Bra027262.1-P	Field mustard	plastid	37.27	36.44
CDY14349	Canola	nucleus	40.0	36.21
Bra022675.1-P	Field mustard	nucleus	38.64	35.27
AT5G53830.1	Thale cress	nucleus	38.64	34.98
CDX96247	Canola	nucleus	37.73	34.3
AT2G33780.1	Thale cress	nucleus	30.91	33.33
KRH37938	Soybean	mitochondrion	19.55	32.82
KRH04611	Soybean	plastid	19.09	32.31
CDX98545	Canola	plastid	28.64	32.14
KRH20439	Soybean	nucleus, plastid	40.91	32.03
KRH21417	Soybean	nucleus	37.27	31.54
Bra005472.1-P	Field mustard	mitochondrion, plastid	25.91	30.98
KRH50064	Soybean	nucleus, plastid	41.82	29.68
CDY17201	Canola	plastid	26.36	29.0
CDY27942	Canola	nucleus	24.55	27.0

Protein Annotations

EnsemblPlants:Zm00001d010759_P001	EnsemblPlants:Zm00001d010759_T001	EnsemblPlantsGene:Zm00001d010759	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:VQ	PANTHER:PTHR33402	PANTHER:PTHR33402:SF9	PFAM:PF05678	ProteinID:AQK94830.1
SEG:seg	UniParc:UPI000220CA4D	UniProt:K7V1C3	MapMan:35.2	:	:

Description

DNA-binding WRKY

Coordinates

chr8:+:127187617..127188279

Molecular Weight (calculated)

23190.7 Da

IEP (calculated)

10.735

GRAVY (calculated)

-0.419

Length

220 amino acids

Sequence
(BLAST)

001: MEVAAAKQLL PMALGPNSPS SSTSSSSPSS AAAAASSPSP RQQHPHAPAP PSPTPRPVPR IIDTTPFPTT FVQADTASFK QVVQRLTGSD TPPPPHKPVK
101: SYPHHHGSGP KKPAFKLYER RIGKSNLKMI APLAMAAAAA PPEALSPSVL DFPSLALRSP VTPLLPDPFN RSQGAEEDEE AAERAAIART GFFLHPSPRG
201: AEPPPRLLPL FPVTSPRMAQ

Best Arabidopsis Sequence Match ( AT1G28280.2 )
(BLAST)

001: MENSPRYREA TNLIPSPRCH NSNNSCGMSS SSESNKPPTT PTRHVTTRSE SGNPYPTTFV QADTSSFKQV VQMLTGSAER PKHGSSLKPN PTHHQPDPRS
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSV NKR

Arabidopsis Description

VQ4VQ motif-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q5M750]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.