Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37691 | Canola | plastid | 50.0 | 51.26 |
| VIT_00s0527g00020.t01 | Wine grape | cytosol, nucleus, plastid | 32.35 | 40.24 |
| Bra005472.1-P | Field mustard | mitochondrion, plastid | 36.27 | 40.22 |
| AT1G28280.1 | Thale cress | nucleus, plastid | 48.53 | 40.08 |
| CDY17201 | Canola | plastid | 39.22 | 40.0 |
| CDY27942 | Canola | nucleus | 37.75 | 38.5 |
| GSMUA_Achr8P27670_001 | Banana | plastid | 20.1 | 37.61 |
| KRH10893 | Soybean | nucleus | 36.27 | 37.19 |
| KRH04611 | Soybean | plastid | 23.04 | 36.15 |
| GSMUA_Achr4P10440_001 | Banana | nucleus | 36.76 | 35.55 |
| AT3G15300.1 | Thale cress | nucleus, plastid | 37.25 | 34.7 |
| KRH37938 | Soybean | mitochondrion | 22.06 | 34.35 |
| Os01t0201250-00 | Rice | plastid | 33.82 | 32.55 |
| TraesCS3B01G158200.1 | Wheat | plastid | 33.33 | 32.38 |
| PGSC0003DMT400076377 | Potato | nucleus | 41.18 | 32.06 |
| Solyc02g078030.1.1 | Tomato | nucleus, plastid | 41.18 | 31.94 |
| TraesCS3A01G313700.1 | Wheat | plastid | 32.84 | 31.9 |
| TraesCS3D01G140600.1 | Wheat | plastid | 32.84 | 31.9 |
| HORVU3Hr1G026840.1 | Barley | plastid | 32.84 | 31.6 |
| Zm00001d038810_P001 | Maize | plastid | 33.33 | 31.34 |
| TraesCS1A01G338700.1 | Wheat | plastid | 36.76 | 31.25 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.73 | 31.23 |
| Zm00001d010759_P001 | Maize | plastid | 33.33 | 30.91 |
| TraesCS1B01G351200.1 | Wheat | plastid | 35.78 | 30.8 |
| TraesCS3B01G307300.1 | Wheat | nucleus, plastid | 34.8 | 30.74 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 35.78 | 30.67 |
| GSMUA_Achr7P13760_001 | Banana | nucleus | 37.25 | 30.65 |
| EES03601 | Sorghum | nucleus, plastid | 35.29 | 30.38 |
| Os01t0747800-01 | Rice | nucleus | 34.31 | 30.3 |
| TraesCS3D01G272900.1 | Wheat | nucleus, plastid | 35.29 | 30.25 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.27 | 30.2 |
| TraesCS1D01G340900.1 | Wheat | plastid | 35.78 | 30.17 |
| AT5G53830.1 | Thale cress | nucleus | 35.78 | 30.04 |
| TraesCS3A01G273600.1 | Wheat | nucleus, plastid | 34.8 | 29.83 |
| GSMUA_Achr4P02580_001 | Banana | nucleus | 37.75 | 29.73 |
| Zm00001d008878_P001 | Maize | cytosol | 30.88 | 29.72 |
| KRH20439 | Soybean | nucleus, plastid | 40.69 | 29.54 |
| EES18519 | Sorghum | plastid | 36.27 | 29.25 |
| EES00109 | Sorghum | cytosol, nucleus, plasma membrane, plastid | 31.37 | 29.22 |
| AT1G80450.1 | Thale cress | nucleus, plastid | 25.0 | 28.81 |
| Zm00001d043450_P001 | Maize | nucleus, plastid | 35.29 | 28.69 |
| GSMUA_Achr9P05800_001 | Banana | nucleus | 35.78 | 28.52 |
| Zm00001d039428_P001 | Maize | plastid | 29.41 | 27.91 |
| Os05t0519000-00 | Rice | plastid | 36.76 | 27.78 |
| HORVU1Hr1G076390.1 | Barley | plastid | 36.76 | 27.37 |
| AT5G08480.2 | Thale cress | cytosol, plastid | 23.04 | 27.17 |
| KRH21417 | Soybean | nucleus | 33.82 | 26.54 |
| KRH50064 | Soybean | nucleus, plastid | 40.2 | 26.45 |
| HORVU3Hr1G071320.1 | Barley | plastid | 34.31 | 23.73 |
Protein Annotations
| MapMan:35.1 | EntrezGene:817945 | ProteinID:AAC69144.1 | ProteinID:AAT69184.1 | ProteinID:AEC08884.1 | ArrayExpress:AT2G33780 |
| EnsemblPlantsGene:AT2G33780 | RefSeq:AT2G33780 | TAIR:AT2G33780 | RefSeq:AT2G33780-TAIR-G | EnsemblPlants:AT2G33780.1 | TAIR:AT2G33780.1 |
| EMBL:AY102548 | Unigene:At.37883 | Unigene:At.67381 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0008150 | RefSeq:NP_180934.1 | UniProt:O23660 | PFAM:PF05678 | PANTHER:PTHR33402 |
| PANTHER:PTHR33402:SF7 | UniParc:UPI00000A7021 | InterPro:VQ | SEG:seg | : | : |
Description
VQ13VQ motif-containing protein 13 [Source:UniProtKB/Swiss-Prot;Acc:O23660]
Coordinates
chr2:-:14290969..14291806
Molecular Weight (calculated)
23116.3 Da
IEP (calculated)
9.783
GRAVY (calculated)
-0.896
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKSPRYRDK AKNLLPSPSS CTTTPTRYVK DDMYETTFIR TDPSSFKQVV QLLTGIPKNP THQPDPRFPP FHSIPPIKAV TNKKQSSSFR LSERRNSMKH
101: YLNINPTHSG PPEILTPTIL NFPALDLSPD TPLMSDPFYR PGSFSQSPSD SKPSFDDDQE RSIKEKGFYL RPSPSTTPRD TEPRLLSLFP MTPIHSPAPS
201: PHDH
101: YLNINPTHSG PPEILTPTIL NFPALDLSPD TPLMSDPFYR PGSFSQSPSD SKPSFDDDQE RSIKEKGFYL RPSPSTTPRD TEPRLLSLFP MTPIHSPAPS
201: PHDH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.