Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17201 | Canola | plastid | 90.5 | 90.5 |
| Bra005472.1-P | Field mustard | mitochondrion, plastid | 77.5 | 84.24 |
| CDY37691 | Canola | plastid | 46.0 | 46.23 |
| AT2G33780.1 | Thale cress | nucleus | 38.5 | 37.75 |
| GSMUA_Achr8P27670_001 | Banana | plastid | 20.0 | 36.7 |
| CDX90141 | Canola | nucleus, plastid | 41.0 | 36.12 |
| CDY35728 | Canola | nucleus, plastid | 41.5 | 35.62 |
| VIT_00s0527g00020.t01 | Wine grape | cytosol, nucleus, plastid | 27.5 | 33.54 |
| CDX69949 | Canola | plastid | 24.5 | 32.67 |
| KRH10893 | Soybean | nucleus | 31.5 | 31.66 |
| KRH37938 | Soybean | mitochondrion | 20.5 | 31.3 |
| GSMUA_Achr4P10440_001 | Banana | nucleus | 32.5 | 30.81 |
| KRH04611 | Soybean | plastid | 20.0 | 30.77 |
| CDY15683 | Canola | nucleus, plastid | 37.5 | 30.74 |
| CDX94599 | Canola | nucleus, plastid | 38.0 | 30.65 |
| CDX97648 | Canola | plastid | 34.0 | 30.63 |
| CDY32307 | Canola | nucleus | 33.5 | 30.18 |
| CDY20126 | Canola | nucleus, plastid | 32.5 | 30.09 |
| CDX96246 | Canola | nucleus | 31.5 | 29.72 |
| CDY37597 | Canola | nucleus | 23.5 | 28.66 |
| CDY40742 | Canola | nucleus | 20.0 | 28.57 |
| CDX79386 | Canola | plastid | 24.5 | 28.49 |
| CDY65903 | Canola | nucleus | 30.0 | 28.17 |
| CDX67947 | Canola | nucleus | 23.0 | 28.05 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 33.0 | 27.73 |
| Solyc02g078030.1.1 | Tomato | nucleus, plastid | 35.5 | 27.0 |
| HORVU3Hr1G026840.1 | Barley | plastid | 28.5 | 26.89 |
| CDX96247 | Canola | nucleus | 32.5 | 26.86 |
| PGSC0003DMT400076377 | Potato | nucleus | 35.0 | 26.72 |
| CDY39978 | Canola | nucleus | 22.0 | 26.35 |
| CDY14349 | Canola | nucleus | 32.0 | 26.34 |
| GSMUA_Achr7P13760_001 | Banana | nucleus | 32.5 | 26.21 |
| TraesCS3A01G313700.1 | Wheat | plastid | 27.5 | 26.19 |
| TraesCS3B01G158200.1 | Wheat | plastid | 27.5 | 26.19 |
| TraesCS3D01G140600.1 | Wheat | plastid | 27.5 | 26.19 |
| TraesCS3B01G307300.1 | Wheat | nucleus, plastid | 30.0 | 25.97 |
| Os01t0201250-00 | Rice | plastid | 27.5 | 25.94 |
| CDX87310 | Canola | nucleus | 21.5 | 25.75 |
| EES03601 | Sorghum | nucleus, plastid | 30.5 | 25.74 |
| EES18519 | Sorghum | plastid | 32.5 | 25.69 |
| TraesCS1B01G351200.1 | Wheat | plastid | 30.0 | 25.32 |
| CDY38669 | Canola | nucleus | 24.5 | 25.26 |
| TraesCS3A01G273600.1 | Wheat | nucleus, plastid | 30.0 | 25.21 |
| Os01t0747800-01 | Rice | nucleus | 29.0 | 25.11 |
| GSMUA_Achr4P02580_001 | Banana | nucleus | 32.5 | 25.1 |
| CDX98545 | Canola | plastid | 24.5 | 25.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.5 | 24.9 |
| Zm00001d038810_P001 | Maize | plastid | 27.0 | 24.88 |
| TraesCS1D01G340900.1 | Wheat | plastid | 30.0 | 24.79 |
| Zm00001d010759_P001 | Maize | plastid | 27.0 | 24.55 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.0 | 24.49 |
| TraesCS3D01G272900.1 | Wheat | nucleus, plastid | 29.0 | 24.37 |
| Zm00001d043450_P001 | Maize | nucleus, plastid | 30.5 | 24.3 |
| TraesCS1A01G338700.1 | Wheat | plastid | 29.0 | 24.17 |
| Os05t0519000-00 | Rice | plastid | 32.5 | 24.07 |
| Zm00001d008878_P001 | Maize | cytosol | 25.5 | 24.06 |
| EES00109 | Sorghum | cytosol, nucleus, plasma membrane, plastid | 25.0 | 22.83 |
| Zm00001d039428_P001 | Maize | plastid | 24.5 | 22.79 |
| KRH20439 | Soybean | nucleus, plastid | 32.0 | 22.78 |
| CDY62120 | Canola | mitochondrion, nucleus | 22.5 | 22.73 |
| KRH21417 | Soybean | nucleus | 29.5 | 22.69 |
| GSMUA_Achr9P05800_001 | Banana | nucleus | 29.0 | 22.66 |
| HORVU1Hr1G076390.1 | Barley | plastid | 31.0 | 22.63 |
| CDX81107 | Canola | nucleus | 22.0 | 20.66 |
| KRH50064 | Soybean | nucleus, plastid | 31.5 | 20.32 |
| HORVU3Hr1G071320.1 | Barley | plastid | 29.5 | 20.0 |
| CDY60233 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 21.5 | 17.99 |
Protein Annotations
| EnsemblPlants:CDY27942 | EnsemblPlantsGene:GSBRNA2T00038854001 | PANTHER:PTHR33402 | ProteinID:CDY27942 | ProteinID:CDY27942.1 | SEG:seg |
| UniParc:UPI0004EF00EC | UniProt:A0A078GS16 | MapMan:35.2 | : | : | : |
Description
BnaCnng05270DBnaCnng05270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GS16]
Coordinates
chrLK032212:+:422870..423472
Molecular Weight (calculated)
21859.6 Da
IEP (calculated)
9.393
GRAVY (calculated)
-0.753
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNSPRNKDD SQTSGMMTIT RITTANRPYI TRSETATVFC ANSSSYRQIV RMLTGPSMNP NPTHQPAPPL RYSLPPLRTV PTKNHSSSSS TTIYERRNQQ
101: LKINPVSSGL TGNVPSLVLP SPDTPLLHDP FGSVTPSPSA SESGEYDPKH DSDVEEREIR EKGFYLHPSP SSTPTDPKPQ LLILFPLTSP RASDSPASST
101: LKINPVSSGL TGNVPSLVLP SPDTPLLHDP FGSVTPSPSA SESGEYDPKH DSDVEEREIR EKGFYLHPSP SSTPTDPKPQ LLILFPLTSP RASDSPASST
001: MENSPRYREA TNLIPSPRCH NSNNSCGMSS SSESNKPPTT PTRHVTTRSE SGNPYPTTFV QADTSSFKQV VQMLTGSAER PKHGSSLKPN PTHHQPDPRS
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSV NKR
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSV NKR
Arabidopsis Description
VQ4VQ motif-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q5M750]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.