Factsheet for HORVU3Hr1G071320.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G272900.1	Wheat	nucleus, plastid	57.29	71.01
TraesCS3A01G273600.1	Wheat	nucleus, plastid	56.27	69.75
TraesCS3B01G307300.1	Wheat	nucleus, plastid	54.58	69.7
EES03601	Sorghum	nucleus, plastid	48.81	60.76
Zm00001d043450_P001	Maize	nucleus, plastid	48.14	56.57
Os01t0747800-01	Rice	nucleus	44.07	56.28
HORVU1Hr1G076390.1	Barley	plastid	47.12	50.73
VIT_19s0014g02490.t01	Wine grape	nucleus, plastid	34.24	48.1
PGSC0003DMT400097260	Potato	nucleus, plastid	37.29	47.83
Solyc07g063070.1.1	Tomato	nucleus, plastid	37.63	47.64
KRH10893	Soybean	nucleus	31.86	47.24
HORVU3Hr1G026840.1	Barley	plastid	33.56	46.7
GSMUA_Achr4P10440_001	Banana	nucleus	32.88	45.97
CDX90141	Canola	nucleus, plastid	33.9	44.05
KRH27258	Soybean	nucleus, plastid	35.93	43.09
CDY35728	Canola	nucleus, plastid	33.9	42.92
KRH22072	Soybean	nucleus, plastid	35.93	42.57
Bra010885.1-P	Field mustard	nucleus, plastid	22.71	41.36
VIT_00s0527g00020.t01	Wine grape	cytosol, nucleus, plastid	22.71	40.85
CDY37691	Canola	plastid	27.46	40.7
CDX96246	Canola	nucleus	29.15	40.57
KRH38333	Soybean	plastid	27.46	40.5
AT5G53830.1	Thale cress	nucleus	33.22	40.33
KRH26132	Soybean	nucleus, plastid	33.56	39.92
CDY65903	Canola	nucleus	28.47	39.44
KRH55250	Soybean	nucleus, plastid	32.54	39.34
Bra003032.1-P	Field mustard	nucleus	30.17	39.21
Solyc02g078030.1.1	Tomato	nucleus, plastid	34.92	39.16
Bra021096.1-P	Field mustard	nucleus, plastid	28.47	38.89
CDY20126	Canola	nucleus, plastid	28.47	38.89
AT3G15300.1	Thale cress	nucleus, plastid	28.81	38.81
Bra022675.1-P	Field mustard	nucleus	31.53	38.59
PGSC0003DMT400076377	Potato	nucleus	34.24	38.55
CDX98545	Canola	plastid	25.42	38.27
CDX96247	Canola	nucleus	31.19	38.02
CDX97648	Canola	plastid	28.47	37.84
CDY32307	Canola	nucleus	28.47	37.84
CDY14349	Canola	nucleus	30.85	37.45
Bra027262.1-P	Field mustard	plastid	28.47	37.33
AT1G28280.1	Thale cress	nucleus, plastid	30.85	36.84
KRH21417	Soybean	nucleus	32.2	36.54
Bra030082.1-P	Field mustard	nucleus, plastid	29.83	36.07
CDY15683	Canola	nucleus, plastid	29.83	36.07
CDX94599	Canola	nucleus, plastid	29.83	35.48
KRH20439	Soybean	nucleus, plastid	33.22	34.88
AT2G33780.1	Thale cress	nucleus	23.73	34.31
KRH04611	Soybean	plastid	14.92	33.85
Bra005472.1-P	Field mustard	mitochondrion, plastid	19.66	31.52
KRH50064	Soybean	nucleus, plastid	32.88	31.29
KRH37938	Soybean	mitochondrion	13.56	30.53
CDY27942	Canola	nucleus	20.0	29.5
CDY17201	Canola	plastid	20.0	29.5

Protein Annotations

EnsemblPlants:HORVU3Hr1G071320.1	EnsemblPlantsGene:HORVU3Hr1G071320	InterPro:VQ	PANTHER:PTHR33402	PANTHER:PTHR33402:SF8	PFAM:PF05678
SEG:seg	UniParc:UPI000B46A892	UniProt:A0A287LKS2	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr3H:+:539797869..539800140

Molecular Weight (calculated)

30795.4 Da

IEP (calculated)

10.944

GRAVY (calculated)

-0.408

Length

295 amino acids

Sequence
(BLAST)

001: LTSLPPSPLP SLFLTNLPTL FPRFKSSSSI SISISSSPPR SSHIPSHPIT IRRHKASMEP CTKQFLPMPP QDPNSPSSST SSSSSSSTSP SHPYHRAQPP
101: HNLPPSPRPV PRTIETTPFP TTFVQADTTS FKQVVQMLTG SEQSSKNAAA AGSGSAGNQA ASGSGSGSGP CRPKKPSFKL YERRSSLKNL KMIAPLAMGA
201: PPSPSTRNAS AAPEILSPSV LDFPSLKLSP VTPLTGDPFY PSPASSSGDA AERAAIADKG FFFHPSPRGA EPPRLLPLFP VSSPRMAASA AAPAE

Best Arabidopsis Sequence Match ( AT1G28280.2 )
(BLAST)

001: MENSPRYREA TNLIPSPRCH NSNNSCGMSS SSESNKPPTT PTRHVTTRSE SGNPYPTTFV QADTSSFKQV VQMLTGSAER PKHGSSLKPN PTHHQPDPRS
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSV NKR

Arabidopsis Description

VQ4VQ motif-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q5M750]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.