CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0527g00020.t01	Wine grape	cytosol, nucleus, plastid	30.65	57.93
KRH20439	Soybean	nucleus, plastid	51.94	57.3
KRH04611	Soybean	plastid	23.87	56.92
KRH37938	Soybean	mitochondrion	23.23	54.96
KRH10893	Soybean	nucleus	34.19	53.27
Bra010885.1-P	Field mustard	nucleus, plastid	26.77	51.23
CDY35728	Canola	nucleus, plastid	37.1	49.36
CDX90141	Canola	nucleus, plastid	35.16	48.02
CDY15683	Canola	nucleus, plastid	37.74	47.95
Bra030082.1-P	Field mustard	nucleus, plastid	37.74	47.95
CDX94599	Canola	nucleus, plastid	38.06	47.58
AT1G28280.1	Thale cress	nucleus, plastid	36.45	45.75
Solyc02g078030.1.1	Tomato	nucleus, plastid	38.71	45.63
CDY37691	Canola	plastid	29.03	45.23
KRH22072	Soybean	nucleus, plastid	36.13	44.98
PGSC0003DMT400076377	Potato	nucleus	37.1	43.89
KRH21417	Soybean	nucleus	36.77	43.85
GSMUA_Achr4P10440_001	Banana	nucleus	29.68	43.6
KRH27258	Soybean	nucleus, plastid	34.52	43.5
Os01t0201250-00	Rice	plastid	29.35	42.92
KRH55250	Soybean	nucleus, plastid	33.55	42.62
KRH38333	Soybean	plastid	27.42	42.5
HORVU3Hr1G026840.1	Barley	plastid	29.03	42.45
GSMUA_AchrUn_...	Banana	nucleus	33.55	42.45
TraesCS3A01G313700.1	Wheat	plastid	28.71	42.38
Zm00001d010759_P001	Maize	plastid	29.68	41.82
TraesCS3D01G272900.1	Wheat	nucleus, plastid	31.94	41.6
Zm00001d038810_P001	Maize	plastid	29.03	41.47
EES03601	Sorghum	nucleus, plastid	31.61	41.35
TraesCS3A01G273600.1	Wheat	nucleus, plastid	31.61	41.18
KRH26132	Soybean	nucleus, plastid	32.9	41.13
TraesCS3B01G307300.1	Wheat	nucleus, plastid	30.65	41.13
Os01t0747800-01	Rice	nucleus	30.65	41.13
Zm00001d008878_P001	Maize	cytosol	28.06	41.04
TraesCS3D01G140600.1	Wheat	plastid	27.74	40.95
TraesCS3B01G158200.1	Wheat	plastid	27.74	40.95
TraesCS1D01G340900.1	Wheat	plastid	31.94	40.91
GSMUA_Achr7P13760_001	Banana	nucleus	32.58	40.73
TraesCS1B01G351200.1	Wheat	plastid	30.97	40.51
Zm00001d043450_P001	Maize	nucleus, plastid	32.58	40.24
AT2G33780.1	Thale cress	nucleus	26.45	40.2
EES00109	Sorghum	cytosol, nucleus, plasma membrane, plastid	28.39	40.18
TraesCS1A01G338700.1	Wheat	plastid	30.97	40.0
Zm00001d039428_P001	Maize	plastid	27.42	39.53
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus, plastid	30.32	39.5
GSMUA_Achr9P05800_001	Banana	nucleus	32.58	39.45
GSMUA_AchrUn_...	Banana	nucleus	31.94	39.13
GSMUA_Achr4P02580_001	Banana	nucleus	32.26	38.61
GSMUA_Achr8P27670_001	Banana	plastid	13.55	38.53
Os05t0519000-00	Rice	plastid	32.9	37.78
EES18519	Sorghum	plastid	30.65	37.55
HORVU1Hr1G076390.1	Barley	plastid	31.61	35.77
Bra005472.1-P	Field mustard	mitochondrion, plastid	20.65	34.78
KRH47420	Soybean	plastid	21.29	34.2
HORVU3Hr1G071320.1	Barley	plastid	31.29	32.88
CDY17201	Canola	plastid	20.65	32.0
KRH44484	Soybean	plastid	20.0	31.96
KRH41023	Soybean	nucleus	17.74	31.61
CDY27942	Canola	nucleus	20.32	31.5
KRH59700	Soybean	nucleus	18.39	30.65

Protein Annotations

EMBL:ACUP02004656	EnsemblPlants:KRH50064	EnsemblPlantsGene:GLYMA_07G198000	EntrezGene:100785516	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:VQ	PANTHER:PTHR33402	PANTHER:PTHR33402:SF9	PFAM:PF05678	ProteinID:KRH50064
ProteinID:KRH50064.1	ProteinID:KRH50065.1	SEG:seg	UniParc:UPI0006ED9070	UniProt:A0A0R0J5I1	MapMan:35.1

Description

hypothetical protein

Coordinates

chr7:+:36646859..36649930

Molecular Weight (calculated)

33743.6 Da

IEP (calculated)

8.499

GRAVY (calculated)

-0.460

Length

310 amino acids

Sequence
(BLAST)

001: MDSPRYHQEH HHHRGGVSLV PSPRHSLSSS NSSSTSSTSS NNNGLHHTQL LSPLTPTAAA AQSPTSSYPP KPVTRSESAN PYPTTFVQAD TTSFKQVVQM
101: LTGSTQTAKQ ASASASEPAK PHTHIPPIKK QTGFKLFERR NSLSKNLSIN PLNNVVVSSF SPRKHHEVLS PSILDFPALV LSPVTPLIPD PFNRSRSLNE
201: NGAGMVMDTA EATEEKAIKE KGFFLHPSPA STPRDEKPRL LPLFPTTTTA AASPGRCVFQ RILIYSTSFC TLSNPSINAE FELCDRIQLL PLEGNDDNET
301: LYLSAVLAEW

Best Arabidopsis Sequence Match ( AT1G28280.1 )
(BLAST)

001: MENSPRYREA TNLIPSPRCH NSNNSCGMSS SSESNKPPTT PTRHVTTRSE SGNPYPTTFV QADTSSFKQV VQMLTGSAER PKHGSSLKPN PTHHQPDPRS
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSG SSSASTS

Arabidopsis Description

VQ4VQ motif-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q5M750]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.