Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G313700.1 | Wheat | plastid | 93.4 | 94.29 |
| TraesCS3D01G140600.1 | Wheat | plastid | 92.45 | 93.33 |
| TraesCS3B01G158200.1 | Wheat | plastid | 92.45 | 93.33 |
| EES00109 | Sorghum | cytosol, nucleus, plasma membrane, plastid | 70.75 | 68.49 |
| Zm00001d008878_P001 | Maize | cytosol | 67.92 | 67.92 |
| Zm00001d039428_P001 | Maize | plastid | 68.4 | 67.44 |
| Os01t0201250-00 | Rice | plastid | 64.62 | 64.62 |
| VIT_19s0014g02490.t01 | Wine grape | nucleus, plastid | 42.92 | 43.33 |
| VIT_00s0527g00020.t01 | Wine grape | cytosol, nucleus, plastid | 32.55 | 42.07 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.0 | 41.9 |
| PGSC0003DMT400097260 | Potato | nucleus, plastid | 45.28 | 41.74 |
| KRH10893 | Soybean | nucleus | 38.21 | 40.7 |
| Solyc07g063070.1.1 | Tomato | nucleus, plastid | 44.34 | 40.34 |
| CDX96246 | Canola | nucleus | 40.09 | 40.09 |
| CDY37691 | Canola | plastid | 36.32 | 38.69 |
| CDY35728 | Canola | nucleus, plastid | 42.45 | 38.63 |
| KRH38333 | Soybean | plastid | 36.32 | 38.5 |
| KRH27258 | Soybean | nucleus, plastid | 44.34 | 38.21 |
| Bra021096.1-P | Field mustard | nucleus, plastid | 38.68 | 37.96 |
| CDY20126 | Canola | nucleus, plastid | 38.68 | 37.96 |
| Bra003032.1-P | Field mustard | nucleus | 40.57 | 37.89 |
| CDX90141 | Canola | nucleus, plastid | 40.57 | 37.89 |
| CDX97648 | Canola | plastid | 39.62 | 37.84 |
| Bra010885.1-P | Field mustard | nucleus, plastid | 28.77 | 37.65 |
| CDY65903 | Canola | nucleus | 37.74 | 37.56 |
| Bra027262.1-P | Field mustard | plastid | 39.62 | 37.33 |
| CDX98545 | Canola | plastid | 34.43 | 37.24 |
| KRH22072 | Soybean | nucleus, plastid | 43.4 | 36.95 |
| CDY32307 | Canola | nucleus | 38.68 | 36.94 |
| Bra022675.1-P | Field mustard | nucleus | 41.98 | 36.93 |
| KRH55250 | Soybean | nucleus, plastid | 42.45 | 36.89 |
| CDX96247 | Canola | nucleus | 41.51 | 36.36 |
| HORVU1Hr1G076390.1 | Barley | plastid | 46.7 | 36.13 |
| AT3G15300.1 | Thale cress | nucleus, plastid | 37.26 | 36.07 |
| KRH26132 | Soybean | nucleus, plastid | 41.98 | 35.89 |
| AT5G53830.1 | Thale cress | nucleus | 41.04 | 35.8 |
| CDY14349 | Canola | nucleus | 41.04 | 35.8 |
| AT1G28280.1 | Thale cress | nucleus, plastid | 41.04 | 35.22 |
| CDY15683 | Canola | nucleus, plastid | 39.62 | 34.43 |
| Bra030082.1-P | Field mustard | nucleus, plastid | 39.62 | 34.43 |
| CDX94599 | Canola | nucleus, plastid | 40.09 | 34.27 |
| HORVU3Hr1G071320.1 | Barley | plastid | 46.7 | 33.56 |
| PGSC0003DMT400076377 | Potato | nucleus | 41.04 | 33.21 |
| Solyc02g078030.1.1 | Tomato | nucleus, plastid | 41.04 | 33.08 |
| KRH04611 | Soybean | plastid | 20.28 | 33.08 |
| AT2G33780.1 | Thale cress | nucleus | 31.6 | 32.84 |
| KRH21417 | Soybean | nucleus | 39.62 | 32.31 |
| KRH37938 | Soybean | mitochondrion | 19.81 | 32.06 |
| Bra005472.1-P | Field mustard | mitochondrion, plastid | 27.36 | 31.52 |
| KRH20439 | Soybean | nucleus, plastid | 39.62 | 29.89 |
| KRH50064 | Soybean | nucleus, plastid | 42.45 | 29.03 |
| CDY27942 | Canola | nucleus | 26.89 | 28.5 |
| CDY17201 | Canola | plastid | 26.89 | 28.5 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G026840.1 | EnsemblPlantsGene:HORVU3Hr1G026840 | InterPro:VQ | PANTHER:PTHR33402 | PANTHER:PTHR33402:SF14 | PFAM:PF05678 |
| SEG:seg | UniParc:UPI000B460658 | UniProt:A0A287KI52 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr3H:-:111461269..111462724
Molecular Weight (calculated)
21728.0 Da
IEP (calculated)
10.264
GRAVY (calculated)
-0.277
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MEATTQEQRP APPPPSPSSV QMQLPHAAAD PSNPFPTTFV QADTTSFKQV VQILTGTPET AAAAAAGGSA GAPAAAKPAP TPTGPKKPAF KLYERRGSMK
101: SLKMLCPLLP AAFAAGGSGG CSGFSPRGFS PRGLEVLSPS MLDFPSLALG SPVTPLPPLP GSREASAAED RAIAEKGFYL HPSPRGNASG RGDLTPPPRL
201: LPLFPLQSPT RQ
101: SLKMLCPLLP AAFAAGGSGG CSGFSPRGFS PRGLEVLSPS MLDFPSLALG SPVTPLPPLP GSREASAAED RAIAEKGFYL HPSPRGNASG RGDLTPPPRL
201: LPLFPLQSPT RQ
001: MENSPRYREA TNLIPSPRCH NSNNSCGMSS SSESNKPPTT PTRHVTTRSE SGNPYPTTFV QADTSSFKQV VQMLTGSAER PKHGSSLKPN PTHHQPDPRS
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSV NKR
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSV NKR
Arabidopsis Description
VQ4VQ motif-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q5M750]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.