Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027262.1-P | Field mustard | plastid | 78.08 | 76.0 |
| Bra021096.1-P | Field mustard | nucleus, plastid | 74.89 | 75.93 |
| CDX97648 | Canola | plastid | 76.26 | 75.23 |
| CDY20126 | Canola | nucleus, plastid | 73.97 | 75.0 |
| CDY32307 | Canola | nucleus | 71.23 | 70.27 |
| CDX98545 | Canola | plastid | 55.25 | 61.73 |
| VIT_19s0014g02490.t01 | Wine grape | nucleus, plastid | 51.14 | 53.33 |
| KRH27258 | Soybean | nucleus, plastid | 57.53 | 51.22 |
| KRH22072 | Soybean | nucleus, plastid | 56.16 | 49.4 |
| KRH26132 | Soybean | nucleus, plastid | 55.71 | 49.19 |
| KRH55250 | Soybean | nucleus, plastid | 54.34 | 48.77 |
| Solyc07g063070.1.1 | Tomato | nucleus, plastid | 51.14 | 48.07 |
| KRH38333 | Soybean | plastid | 43.38 | 47.5 |
| PGSC0003DMT400097260 | Potato | nucleus, plastid | 49.77 | 47.39 |
| AT5G53830.1 | Thale cress | nucleus | 51.6 | 46.5 |
| GSMUA_Achr8P27670_001 | Banana | plastid | 21.92 | 44.04 |
| AT1G28280.1 | Thale cress | nucleus, plastid | 44.75 | 39.68 |
| TraesCS3B01G307300.1 | Wheat | nucleus, plastid | 41.55 | 39.39 |
| EES03601 | Sorghum | nucleus, plastid | 42.47 | 39.24 |
| Os01t0201250-00 | Rice | plastid | 37.44 | 38.68 |
| GSMUA_Achr4P10440_001 | Banana | nucleus | 36.99 | 38.39 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.92 | 38.37 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 41.1 | 37.82 |
| Zm00001d010759_P001 | Maize | plastid | 37.9 | 37.73 |
| TraesCS3D01G140600.1 | Wheat | plastid | 36.07 | 37.62 |
| TraesCS3B01G158200.1 | Wheat | plastid | 36.07 | 37.62 |
| TraesCS3A01G313700.1 | Wheat | plastid | 36.07 | 37.62 |
| GSMUA_Achr7P13760_001 | Banana | nucleus | 42.47 | 37.5 |
| HORVU3Hr1G026840.1 | Barley | plastid | 36.07 | 37.26 |
| AT2G33780.1 | Thale cress | nucleus | 34.7 | 37.25 |
| TraesCS3A01G273600.1 | Wheat | nucleus, plastid | 40.18 | 36.97 |
| Zm00001d038810_P001 | Maize | plastid | 36.53 | 36.87 |
| Os01t0747800-01 | Rice | nucleus | 38.81 | 36.8 |
| TraesCS3D01G272900.1 | Wheat | nucleus, plastid | 39.73 | 36.55 |
| Zm00001d008878_P001 | Maize | cytosol | 35.16 | 36.32 |
| EES00109 | Sorghum | cytosol, nucleus, plasma membrane, plastid | 35.16 | 35.16 |
| GSMUA_Achr9P05800_001 | Banana | nucleus | 41.1 | 35.16 |
| GSMUA_Achr4P02580_001 | Banana | nucleus | 41.55 | 35.14 |
| Zm00001d039428_P001 | Maize | plastid | 34.25 | 34.88 |
| TraesCS1B01G351200.1 | Wheat | plastid | 36.99 | 34.18 |
| TraesCS1A01G338700.1 | Wheat | plastid | 37.44 | 34.17 |
| TraesCS1D01G340900.1 | Wheat | plastid | 37.44 | 33.88 |
| Zm00001d043450_P001 | Maize | nucleus, plastid | 38.81 | 33.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.81 | 33.6 |
| Os05t0519000-00 | Rice | plastid | 39.73 | 32.22 |
| EES18519 | Sorghum | plastid | 36.99 | 32.02 |
| HORVU1Hr1G076390.1 | Barley | plastid | 38.81 | 31.02 |
| AT1G80450.1 | Thale cress | nucleus, plastid | 23.74 | 29.38 |
| AT5G08480.2 | Thale cress | cytosol, plastid | 22.83 | 28.9 |
| HORVU3Hr1G071320.1 | Barley | plastid | 38.81 | 28.81 |
Protein Annotations
| MapMan:35.1 | EntrezGene:820761 | UniProt:A0A178VH72 | ProteinID:AEE75642.1 | ArrayExpress:AT3G15300 | EnsemblPlantsGene:AT3G15300 |
| RefSeq:AT3G15300 | TAIR:AT3G15300 | RefSeq:AT3G15300-TAIR-G | EnsemblPlants:AT3G15300.1 | TAIR:AT3G15300.1 | ProteinID:BAB02159.1 |
| EMBL:BT010686 | EMBL:BT011503 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0008150 | RefSeq:NP_188148.1 | ProteinID:OAP05767.1 | PFAM:PF05678 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33402 | PANTHER:PTHR33402:SF6 | UniProt:Q9LDZ1 | UniParc:UPI00000A175A |
| InterPro:VQ | SEG:seg | : | : | : | : |
Description
VQ19VQ motif-containing protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDZ1]
Coordinates
chr3:-:5147244..5148340
Molecular Weight (calculated)
23662.9 Da
IEP (calculated)
9.956
GRAVY (calculated)
-0.658
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MEISTNPPSS SSSSVSSSII NGSLHHHIIT RSDHYPTTFV QADSSSFKQV VQMLTGSSSP RSPDSPRPPT TPSGKGNFVI PPIKTAQPKK HSGNKLYERR
101: SHGGFNNNLK NSLMINTLMI GGGGAGSPRF SPRNQEILSP SCLDFPKLAL NSPVTPLKQG TNGNEGDPFD KMSPLSEEER GIADKGYYLH RSPISTPRDS
201: EPQLLPLFPV TSPRLSPEM
101: SHGGFNNNLK NSLMINTLMI GGGGAGSPRF SPRNQEILSP SCLDFPKLAL NSPVTPLKQG TNGNEGDPFD KMSPLSEEER GIADKGYYLH RSPISTPRDS
201: EPQLLPLFPV TSPRLSPEM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.