Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005995.1-P | Field mustard | cytosol, nucleus, plastid | 63.58 | 63.22 |
| KRH59700 | Soybean | nucleus | 49.13 | 45.7 |
| KRH41023 | Soybean | nucleus | 43.35 | 43.1 |
| CDX81107 | Canola | nucleus | 50.29 | 40.85 |
| PGSC0003DMT400030219 | Potato | cytosol | 34.1 | 40.41 |
| CDY60233 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 50.87 | 36.82 |
| Solyc12g088490.1.1 | Tomato | cytosol | 32.95 | 35.19 |
| AT1G80450.1 | Thale cress | nucleus, plastid | 30.06 | 29.38 |
| AT5G53830.1 | Thale cress | nucleus | 32.95 | 23.46 |
| AT2G33780.1 | Thale cress | nucleus | 27.17 | 23.04 |
| AT3G15300.1 | Thale cress | nucleus, plastid | 28.9 | 22.83 |
| AT1G28280.1 | Thale cress | nucleus, plastid | 32.37 | 22.67 |
Protein Annotations
| MapMan:35.1 | EntrezGene:830747 | UniProt:A0A178UC47 | ProteinID:AED91308.1 | ProteinID:AED91309.1 | ProteinID:ANM68666.1 |
| ArrayExpress:AT5G08480 | EnsemblPlantsGene:AT5G08480 | RefSeq:AT5G08480 | TAIR:AT5G08480 | RefSeq:AT5G08480-TAIR-G | EnsemblPlants:AT5G08480.2 |
| TAIR:AT5G08480.2 | EMBL:AY085562 | ProteinID:BAB09997.1 | EMBL:BT026100 | EMBL:DQ446932 | EMBL:DQ446933 |
| EMBL:DQ653274 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 |
| RefSeq:NP_001318511.1 | RefSeq:NP_001330395.1 | RefSeq:NP_850793.1 | ProteinID:OAO90727.1 | PFAM:PF05678 | PO:PO:0000293 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR33402 | PANTHER:PTHR33402:SF2 | UniProt:Q9FNP0 |
| UniParc:UPI000009F062 | InterPro:VQ | SEG:seg | : | : | : |
Description
VQ31VQ motif-containing protein 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP0]
Coordinates
chr5:+:2743319..2745111
Molecular Weight (calculated)
18900.4 Da
IEP (calculated)
9.880
GRAVY (calculated)
-0.676
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSKGSQNVA TTCKPVTTFV QTDTNTFREI VQRLTGPTEN NAAAATPEAT VIKTAIQKRP TSKLHERRQC MRPKLEIVKP PLSFKPTGTT PSSKSGNTNL
101: LTSPVGTPSS LFSNLSLIEG EPDSCTTNIE EEEKAIKERR FYLHPSPRSK PGYTEPELLT LFPLTSPNSS GKP
101: LTSPVGTPSS LFSNLSLIEG EPDSCTTNIE EEEKAIKERR FYLHPSPRSK PGYTEPELLT LFPLTSPNSS GKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.