Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003032.1-P | Field mustard | nucleus | 70.37 | 75.33 |
| CDY14349 | Canola | nucleus | 72.02 | 72.02 |
| Bra022675.1-P | Field mustard | nucleus | 70.37 | 70.95 |
| CDX96247 | Canola | nucleus | 67.08 | 67.36 |
| CDX96246 | Canola | nucleus | 58.02 | 66.51 |
| CDY65903 | Canola | nucleus | 56.79 | 64.79 |
| AT3G15300.1 | Thale cress | nucleus, plastid | 46.5 | 51.6 |
| VIT_19s0014g02490.t01 | Wine grape | nucleus, plastid | 43.21 | 50.0 |
| KRH22072 | Soybean | nucleus, plastid | 50.62 | 49.4 |
| KRH27258 | Soybean | nucleus, plastid | 49.38 | 48.78 |
| KRH38333 | Soybean | plastid | 39.92 | 48.5 |
| Solyc07g063070.1.1 | Tomato | nucleus, plastid | 46.5 | 48.5 |
| PGSC0003DMT400097260 | Potato | nucleus, plastid | 45.68 | 48.26 |
| KRH55250 | Soybean | nucleus, plastid | 48.15 | 47.95 |
| KRH26132 | Soybean | nucleus, plastid | 47.74 | 46.77 |
| GSMUA_Achr8P27670_001 | Banana | plastid | 18.93 | 42.2 |
| TraesCS3A01G313700.1 | Wheat | plastid | 36.21 | 41.9 |
| Zm00001d038810_P001 | Maize | plastid | 37.04 | 41.47 |
| TraesCS3D01G140600.1 | Wheat | plastid | 35.8 | 41.43 |
| TraesCS3B01G158200.1 | Wheat | plastid | 35.8 | 41.43 |
| HORVU3Hr1G026840.1 | Barley | plastid | 35.8 | 41.04 |
| Zm00001d008878_P001 | Maize | cytosol | 35.8 | 41.04 |
| EES03601 | Sorghum | nucleus, plastid | 39.09 | 40.08 |
| EES00109 | Sorghum | cytosol, nucleus, plasma membrane, plastid | 35.8 | 39.73 |
| TraesCS3B01G307300.1 | Wheat | nucleus, plastid | 37.45 | 39.39 |
| AT1G28280.1 | Thale cress | nucleus, plastid | 39.92 | 39.27 |
| TraesCS1B01G351200.1 | Wheat | plastid | 38.27 | 39.24 |
| Os01t0201250-00 | Rice | plastid | 34.16 | 39.15 |
| TraesCS3D01G272900.1 | Wheat | nucleus, plastid | 38.27 | 39.08 |
| TraesCS3A01G273600.1 | Wheat | nucleus, plastid | 38.27 | 39.08 |
| Zm00001d039428_P001 | Maize | plastid | 34.57 | 39.07 |
| TraesCS1D01G340900.1 | Wheat | plastid | 38.68 | 38.84 |
| Zm00001d010759_P001 | Maize | plastid | 34.98 | 38.64 |
| GSMUA_Achr4P10440_001 | Banana | nucleus | 32.92 | 37.91 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 37.04 | 37.82 |
| TraesCS1A01G338700.1 | Wheat | plastid | 37.04 | 37.5 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.45 | 37.14 |
| GSMUA_Achr7P13760_001 | Banana | nucleus | 37.86 | 37.1 |
| Os01t0747800-01 | Rice | nucleus | 34.98 | 36.8 |
| GSMUA_Achr4P02580_001 | Banana | nucleus | 38.27 | 35.91 |
| AT2G33780.1 | Thale cress | nucleus | 30.04 | 35.78 |
| EES18519 | Sorghum | plastid | 36.21 | 34.78 |
| Os05t0519000-00 | Rice | plastid | 38.27 | 34.44 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.8 | 34.39 |
| Zm00001d043450_P001 | Maize | nucleus, plastid | 35.39 | 34.26 |
| AT1G80450.1 | Thale cress | nucleus, plastid | 24.69 | 33.9 |
| HORVU3Hr1G071320.1 | Barley | plastid | 40.33 | 33.22 |
| GSMUA_Achr9P05800_001 | Banana | nucleus | 34.98 | 33.2 |
| AT5G08480.2 | Thale cress | cytosol, plastid | 23.46 | 32.95 |
| HORVU1Hr1G076390.1 | Barley | plastid | 36.63 | 32.48 |
Protein Annotations
| MapMan:35.1 | EntrezGene:835464 | UniProt:A0A178U9R4 | ProteinID:AED96411.1 | EMBL:AF372918 | ArrayExpress:AT5G53830 |
| EnsemblPlantsGene:AT5G53830 | RefSeq:AT5G53830 | TAIR:AT5G53830 | RefSeq:AT5G53830-TAIR-G | EnsemblPlants:AT5G53830.1 | TAIR:AT5G53830.1 |
| EMBL:AY127951 | ProteinID:BAB09555.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0008150 | RefSeq:NP_200194.1 | ProteinID:OAO90566.1 | PFAM:PF05678 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001185 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33402 |
| PANTHER:PTHR33402:SF6 | UniProt:Q9FHZ3 | UniParc:UPI000009CD5C | InterPro:VQ | SEG:seg | : |
Description
VQ33VQ motif-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHZ3]
Coordinates
chr5:+:21856948..21858102
Molecular Weight (calculated)
26920.5 Da
IEP (calculated)
10.183
GRAVY (calculated)
-0.802
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVSTSSMSS KPEQMQNPPP MISSPRFQPQ IISPHHHDQH QHLSNPYPTT FVQADTSTFK QVVQMLTGSS TDTTTGKHHE APSPVNNNNK GSSFSIPPIK
101: KTNSFKLYER RQNNNNMFAK NDLMINTLRL QNSQRLMFTG GNSSHHQSPR FSPRNSSSSE NILLSPSMLD FPKLGLNSPV TPLRSNDDPF NKSSPLSLGN
201: SSEEDKAIAD KGFYLHPSPV STPRDSQPLL LPLFPVASPA RNS
101: KTNSFKLYER RQNNNNMFAK NDLMINTLRL QNSQRLMFTG GNSSHHQSPR FSPRNSSSSE NILLSPSMLD FPKLGLNSPV TPLRSNDDPF NKSSPLSLGN
201: SSEEDKAIAD KGFYLHPSPV STPRDSQPLL LPLFPVASPA RNS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.