Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- vacuole 1
- mitochondrion 1
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03601 | Sorghum | nucleus, plastid | 70.56 | 68.78 |
| Zm00001d043450_P001 | Maize | nucleus, plastid | 72.29 | 66.53 |
| TraesCS3D01G272900.1 | Wheat | nucleus, plastid | 58.87 | 57.14 |
| TraesCS3A01G273600.1 | Wheat | nucleus, plastid | 58.44 | 56.72 |
| TraesCS3B01G307300.1 | Wheat | nucleus, plastid | 56.28 | 56.28 |
| VIT_19s0014g02490.t01 | Wine grape | nucleus, plastid | 43.72 | 48.1 |
| Os05t0519000-00 | Rice | plastid | 55.41 | 47.41 |
| GSMUA_Achr4P10440_001 | Banana | nucleus | 41.56 | 45.5 |
| PGSC0003DMT400097260 | Potato | nucleus, plastid | 44.16 | 44.35 |
| Solyc07g063070.1.1 | Tomato | nucleus, plastid | 44.59 | 44.21 |
| HORVU3Hr1G071320.1 | Barley | plastid | 56.28 | 44.07 |
| KRH10893 | Soybean | nucleus | 37.66 | 43.72 |
| CDX90141 | Canola | nucleus, plastid | 42.86 | 43.61 |
| Bra021096.1-P | Field mustard | nucleus, plastid | 40.69 | 43.52 |
| Os01t0201250-00 | Rice | plastid | 39.83 | 43.4 |
| CDY35728 | Canola | nucleus, plastid | 43.72 | 43.35 |
| Bra010885.1-P | Field mustard | nucleus, plastid | 30.3 | 43.21 |
| CDY20126 | Canola | nucleus, plastid | 40.26 | 43.06 |
| VIT_00s0527g00020.t01 | Wine grape | cytosol, nucleus, plastid | 29.87 | 42.07 |
| CDY32307 | Canola | nucleus | 40.26 | 41.89 |
| KRH27258 | Soybean | nucleus, plastid | 44.16 | 41.46 |
| KRH38333 | Soybean | plastid | 35.5 | 41.0 |
| CDX97648 | Canola | plastid | 39.39 | 40.99 |
| PGSC0003DMT400076377 | Potato | nucleus | 46.32 | 40.84 |
| CDY37691 | Canola | plastid | 35.06 | 40.7 |
| Bra027262.1-P | Field mustard | plastid | 39.39 | 40.44 |
| KRH22072 | Soybean | nucleus, plastid | 42.86 | 39.76 |
| Solyc02g078030.1.1 | Tomato | nucleus, plastid | 44.59 | 39.16 |
| CDX96246 | Canola | nucleus | 35.93 | 39.15 |
| CDY65903 | Canola | nucleus | 35.93 | 38.97 |
| AT3G15300.1 | Thale cress | nucleus, plastid | 36.8 | 38.81 |
| CDY15683 | Canola | nucleus, plastid | 40.69 | 38.52 |
| Bra030082.1-P | Field mustard | nucleus, plastid | 40.69 | 38.52 |
| AT1G28280.1 | Thale cress | nucleus, plastid | 41.13 | 38.46 |
| KRH26132 | Soybean | nucleus, plastid | 40.69 | 37.9 |
| CDX98545 | Canola | plastid | 32.03 | 37.76 |
| KRH55250 | Soybean | nucleus, plastid | 39.83 | 37.7 |
| CDX94599 | Canola | nucleus, plastid | 40.26 | 37.5 |
| Bra003032.1-P | Field mustard | nucleus | 36.8 | 37.44 |
| CDY14349 | Canola | nucleus | 38.1 | 36.21 |
| Bra022675.1-P | Field mustard | nucleus | 36.8 | 35.27 |
| AT5G53830.1 | Thale cress | nucleus | 36.8 | 34.98 |
| CDX96247 | Canola | nucleus | 36.36 | 34.71 |
| KRH21417 | Soybean | nucleus | 38.96 | 34.62 |
| AT2G33780.1 | Thale cress | nucleus | 30.3 | 34.31 |
| KRH04611 | Soybean | plastid | 18.61 | 33.08 |
| KRH37938 | Soybean | mitochondrion | 18.61 | 32.82 |
| KRH20439 | Soybean | nucleus, plastid | 39.83 | 32.74 |
| Bra005472.1-P | Field mustard | mitochondrion, plastid | 24.68 | 30.98 |
| KRH50064 | Soybean | nucleus, plastid | 41.13 | 30.65 |
| CDY17201 | Canola | plastid | 25.11 | 29.0 |
| CDY27942 | Canola | nucleus | 25.11 | 29.0 |
Protein Annotations
| EMBL:AK073166 | EnsemblPlants:Os01t0747800-01 | EnsemblPlantsGene:Os01g0747800 | EntrezGene:4325545 | InterPro:VQ | PANTHER:PTHR33402 |
| PANTHER:PTHR33402:SF8 | PFAM:PF05678 | ProteinID:BAB56029.1 | ProteinID:BAF06150.1 | ProteinID:BAS74331.1 | ProteinID:EAZ13528.1 |
| RefSeq:XP_015641446.1 | SEG:seg | UniParc:UPI00000A697B | UniProt:Q94J34 | MapMan:35.1 | : |
Description
VQ motif-containing protein 3VQ domain containing protein. (Os01t0747800-01)
Coordinates
chr1:-:31299014..31300157
Molecular Weight (calculated)
24092.6 Da
IEP (calculated)
10.789
GRAVY (calculated)
-0.469
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPSTKQLLP MPQQDPNSPS SSTSSSSSSS TSPSHPHHRA PLPPSPRPVP RTIETTPFPT TFVQADTASF KQVVQMLTGA EQPSKNAATA ATAAAGNSSA
101: AGIGGGQGAN GPCRPKKPAF KLYERRSSLK NLKMIAPLAM GALPSPTGRK VGTPEILSPS VLDFPSLKLS PVTPLTGEPF NRSPASSSED AERAAISERG
201: FFLHPSPRGA EPPRLLPLFP VTSPRMAAPS E
101: AGIGGGQGAN GPCRPKKPAF KLYERRSSLK NLKMIAPLAM GALPSPTGRK VGTPEILSPS VLDFPSLKLS PVTPLTGEPF NRSPASSSED AERAAISERG
201: FFLHPSPRGA EPPRLLPLFP VTSPRMAAPS E
001: MENSPRYREA TNLIPSPRCH NSNNSCGMSS SSESNKPPTT PTRHVTTRSE SGNPYPTTFV QADTSSFKQV VQMLTGSAER PKHGSSLKPN PTHHQPDPRS
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSV NKR
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSV NKR
Arabidopsis Description
VQ4VQ motif-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q5M750]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.