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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • nucleus 4
  • plastid 3
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:nucleus
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17201 Canola plastid 94.02 86.5
CDY27942 Canola nucleus 84.24 77.5
Bra010885.1-P Field mustard nucleus, plastid 35.87 40.74
AT2G33780.1 Thale cress nucleus 40.22 36.27
GSMUA_Achr8P27670_001 Banana plastid 20.65 34.86
Bra009343.1-P Field mustard cytosol, plastid 19.02 34.31
VIT_00s0527g00020.t01 Wine grape cytosol, nucleus, plastid 30.43 34.15
KRH10893 Soybean nucleus 34.78 32.16
Bra021096.1-P Field mustard nucleus, plastid 36.96 31.48
KRH37938 Soybean mitochondrion 22.28 31.3
KRH04611 Soybean plastid 21.74 30.77
Bra030082.1-P Field mustard nucleus, plastid 40.76 30.74
Bra027262.1-P Field mustard plastid 37.5 30.67
GSMUA_Achr4P10440_001 Banana nucleus 33.7 29.38
Bra008473.1-P Field mustard nucleus 25.54 28.66
Bra003566.1-P Field mustard nucleus 26.09 27.75
Bra005995.1-P Field mustard cytosol, nucleus, plastid 26.09 27.59
HORVU3Hr1G026840.1 Barley plastid 31.52 27.36
GSMUA_Achr10P... Banana cytosol, mitochondrion, nucleus, plastid 35.33 27.31
TraesCS3A01G313700.1 Wheat plastid 30.98 27.14
PGSC0003DMT400076377 Potato nucleus 38.59 27.1
Solyc02g078030.1.1 Tomato nucleus, plastid 38.59 27.0
Bra035182.1-P Field mustard nucleus 24.46 26.95
TraesCS3B01G158200.1 Wheat plastid 30.43 26.67
TraesCS3D01G140600.1 Wheat plastid 30.43 26.67
Bra003032.1-P Field mustard nucleus 32.61 26.43
Os01t0201250-00 Rice plastid 30.43 26.42
TraesCS3A01G273600.1 Wheat nucleus, plastid 33.7 26.05
Zm00001d010759_P001 Maize plastid 30.98 25.91
TraesCS1B01G351200.1 Wheat plastid 33.15 25.74
TraesCS3B01G307300.1 Wheat nucleus, plastid 32.07 25.54
TraesCS1A01G338700.1 Wheat plastid 33.15 25.42
Zm00001d038810_P001 Maize plastid 29.89 25.35
EES03601 Sorghum nucleus, plastid 32.61 25.32
Bra022675.1-P Field mustard nucleus 33.15 25.31
TraesCS3D01G272900.1 Wheat nucleus, plastid 32.61 25.21
EES18519 Sorghum plastid 34.24 24.9
Os01t0747800-01 Rice nucleus 30.98 24.68
GSMUA_Achr7P13760_001 Banana nucleus 33.15 24.6
Zm00001d008878_P001 Maize cytosol 28.26 24.53
GSMUA_AchrUn_... Banana nucleus 32.61 24.49
TraesCS1D01G340900.1 Wheat plastid 32.07 24.38
GSMUA_Achr4P02580_001 Banana nucleus 34.24 24.32
Zm00001d043450_P001 Maize nucleus, plastid 33.15 24.3
EES00109 Sorghum cytosol, nucleus, plasma membrane, plastid 28.8 24.2
Zm00001d039428_P001 Maize plastid 28.26 24.19
GSMUA_AchrUn_... Banana nucleus 33.15 24.11
KRH20439 Soybean nucleus, plastid 36.41 23.84
KRH21417 Soybean nucleus 33.15 23.46
Os05t0519000-00 Rice plastid 34.24 23.33
GSMUA_Achr9P05800_001 Banana nucleus 30.98 22.27
HORVU1Hr1G076390.1 Barley plastid 32.61 21.9
KRH50064 Soybean nucleus, plastid 34.78 20.65
HORVU3Hr1G071320.1 Barley plastid 31.52 19.66
Protein Annotations
EnsemblPlants:Bra005472.1EnsemblPlants:Bra005472.1-PEnsemblPlantsGene:Bra005472PANTHER:PTHR33402SEG:segUniParc:UPI0002547309
UniProt:M4CMN4MapMan:35.2::::
Description
AT2G33780 (E=8e-023) | VQ motif-containing protein
Coordinates
chrA05:+:5686240..5686794
Molecular Weight (calculated)
20122.6 Da
IEP (calculated)
9.009
GRAVY (calculated)
-0.660
Length
184 amino acids
Sequence
(BLAST)
001: MTITRITTAN RPYITRSETA TIFCANSSSY RQIVQMLTGP SMNPNPTHQP APPLRYSLPP VRTVPTKNHS SSSSSTIYER RNQQLKINPV RSGLTGNVPS
101: LVLTSPDTPL LHDPFGSVTP SPSASEPGEY DPKHDSDVEE REIREKGFYL HPSPSSTPTD PKPQLLILFP LTSPRASDSP ASST
Best Arabidopsis Sequence Match ( AT2G33780.1 )
(BLAST)
001: MEKSPRYRDK AKNLLPSPSS CTTTPTRYVK DDMYETTFIR TDPSSFKQVV QLLTGIPKNP THQPDPRFPP FHSIPPIKAV TNKKQSSSFR LSERRNSMKH
101: YLNINPTHSG PPEILTPTIL NFPALDLSPD TPLMSDPFYR PGSFSQSPSD SKPSFDDDQE RSIKEKGFYL RPSPSTTPRD TEPRLLSLFP MTPIHSPAPS
201: PHDH
Arabidopsis Description
VQ13VQ motif-containing protein 13 [Source:UniProtKB/Swiss-Prot;Acc:O23660]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.