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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:nucleus
iPSORT:plastid
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX67947 Canola nucleus 69.94 73.78
Bra035182.1-P Field mustard nucleus 67.05 69.46
Bra008473.1-P Field mustard nucleus 59.54 62.8
AT1G80450.1 Thale cress nucleus, plastid 64.16 62.71
PGSC0003DMT400036669 Potato nucleus, plastid 38.15 39.76
Solyc03g117500.1.1 Tomato plastid 38.15 39.29
KRH47420 Soybean plastid 37.57 33.68
KRH44484 Soybean plastid 37.57 33.51
VIT_09s0002g07540.t01 Wine grape plastid 34.68 32.26
Bra009343.1-P Field mustard cytosol, plastid 16.76 28.43
Bra010885.1-P Field mustard nucleus, plastid 24.86 26.54
GSMUA_Achr3P19850_001 Banana nucleus 31.21 26.21
Bra005472.1-P Field mustard mitochondrion, plastid 27.75 26.09
Bra005995.1-P Field mustard cytosol, nucleus, plastid 25.43 25.29
Bra021096.1-P Field mustard nucleus, plastid 31.21 25.0
Bra003032.1-P Field mustard nucleus 31.79 24.23
Bra022675.1-P Field mustard nucleus 33.53 24.07
Bra027262.1-P Field mustard plastid 31.21 24.0
Bra030082.1-P Field mustard nucleus, plastid 30.64 21.72
Protein Annotations
EnsemblPlants:Bra003566.1EnsemblPlants:Bra003566.1-PEnsemblPlantsGene:Bra003566InterPro:VQPANTHER:PTHR33402PANTHER:PTHR33402:SF3
PFAM:PF05678SEG:segUniParc:UPI00025412FDUniProt:M4CH83MapMan:35.1:
Description
AT1G80450 (E=7e-063) | VQ motif-containing protein
Coordinates
chrA07:-:13824094..13824615
Molecular Weight (calculated)
19664.2 Da
IEP (calculated)
10.278
GRAVY (calculated)
-0.849
Length
173 amino acids
Sequence
(BLAST)
001: MSHQNHHQLP TYATDPNTMF VQADPSNFRN IVQKLTGASP PELSAVSAAR RKLPLTPKKP AFKLHERRQT SKKMKLEINN ITDDSLSHFN RGFLVSPVSH
101: LDPFWTRVSP HSAREYPHPT PDNKEQKAIA EKGFYFLPSP RSGAEPAPEL LPLFPLRSLN ATNQRTEEDY RNS
Best Arabidopsis Sequence Match ( AT1G80450.1 )
(BLAST)
001: MSHQQPPSYA TEPNTMFVQA DPSNFRNIVQ KLTGAPPDIS SSSFSAVSAA HQKLPLTPKK PAFKLHERRQ SSKKMELKVN NITNPNDAFS HFHRGFLVSP
101: VSHLDPFWAR VSPHSAREEH HAQPDKEEQK AIAEKGFYFL PSPRSGSEPA PELLPLFPLR SPNGTNHRIH EDNHRDS
Arabidopsis Description
VQ11VQ motif-containing protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L3]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.