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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 2
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96246 Canola nucleus 83.4 94.81
Bra003032.1-P Field mustard nucleus 77.18 81.94
AT5G53830.1 Thale cress nucleus 70.95 70.37
VIT_19s0014g02490.t01 Wine grape nucleus, plastid 45.23 51.9
KRH27258 Soybean nucleus, plastid 52.28 51.22
PGSC0003DMT400097260 Potato nucleus, plastid 48.13 50.43
KRH22072 Soybean nucleus, plastid 51.45 49.8
KRH38333 Soybean plastid 41.08 49.5
KRH26132 Soybean nucleus, plastid 50.62 49.19
Solyc07g063070.1.1 Tomato nucleus, plastid 47.3 48.93
KRH55250 Soybean nucleus, plastid 49.38 48.77
Bra021096.1-P Field mustard nucleus, plastid 43.15 48.15
Bra027262.1-P Field mustard plastid 44.81 48.0
Bra010885.1-P Field mustard nucleus, plastid 31.95 47.53
GSMUA_Achr8P27670_001 Banana plastid 20.75 45.87
Bra030082.1-P Field mustard nucleus, plastid 43.57 43.03
TraesCS3A01G313700.1 Wheat plastid 36.93 42.38
HORVU3Hr1G026840.1 Barley plastid 36.93 41.98
TraesCS3B01G158200.1 Wheat plastid 36.51 41.9
TraesCS3D01G140600.1 Wheat plastid 36.51 41.9
Zm00001d008878_P001 Maize cytosol 36.51 41.51
Os01t0201250-00 Rice plastid 36.51 41.51
EES00109 Sorghum cytosol, nucleus, plasma membrane, plastid 36.1 39.73
TraesCS3B01G307300.1 Wheat nucleus, plastid 37.76 39.39
EES03601 Sorghum nucleus, plastid 38.59 39.24
GSMUA_Achr4P10440_001 Banana nucleus 34.02 38.86
TraesCS1B01G351200.1 Wheat plastid 38.17 38.82
Zm00001d038810_P001 Maize plastid 34.85 38.71
TraesCS3D01G272900.1 Wheat nucleus, plastid 38.17 38.66
TraesCS3A01G273600.1 Wheat nucleus, plastid 38.17 38.66
Zm00001d010759_P001 Maize plastid 35.27 38.64
GSMUA_AchrUn_... Banana nucleus 39.0 38.37
GSMUA_Achr7P13760_001 Banana nucleus 39.42 38.31
Zm00001d039428_P001 Maize plastid 34.02 38.14
TraesCS1D01G340900.1 Wheat plastid 38.17 38.02
TraesCS1A01G338700.1 Wheat plastid 37.76 37.92
GSMUA_Achr4P02580_001 Banana nucleus 40.25 37.45
GSMUA_Achr10P... Banana cytosol, mitochondrion, nucleus, plastid 36.93 37.4
Os01t0747800-01 Rice nucleus 35.27 36.8
GSMUA_AchrUn_... Banana nucleus 38.59 36.76
Bra009343.1-P Field mustard cytosol, plastid 15.35 36.27
Bra008473.1-P Field mustard nucleus 24.48 35.98
EES18519 Sorghum plastid 37.76 35.97
Os05t0519000-00 Rice plastid 39.83 35.56
Zm00001d043450_P001 Maize nucleus, plastid 36.93 35.46
GSMUA_Achr9P05800_001 Banana nucleus 36.51 34.38
Bra003566.1-P Field mustard nucleus 24.07 33.53
Bra005472.1-P Field mustard mitochondrion, plastid 25.31 33.15
Bra035182.1-P Field mustard nucleus 22.82 32.93
HORVU1Hr1G076390.1 Barley plastid 36.93 32.48
HORVU3Hr1G071320.1 Barley plastid 38.59 31.53
Bra005995.1-P Field mustard cytosol, nucleus, plastid 21.58 29.89
Protein Annotations
EnsemblPlants:Bra022675.1EnsemblPlants:Bra022675.1-PEnsemblPlantsGene:Bra022675InterPro:VQPANTHER:PTHR33402PANTHER:PTHR33402:SF6
PFAM:PF05678SEG:segUniParc:UPI0002546A3DUniProt:M4E1M5MapMan:35.1:
Description
AT5G53830 (E=8e-091) | VQ motif-containing protein
Coordinates
chrA02:-:8092563..8093288
Molecular Weight (calculated)
26932.6 Da
IEP (calculated)
10.349
GRAVY (calculated)
-0.820
Length
241 amino acids
Sequence
(BLAST)
001: MEVSSTSSIC SKPEQIMQNY PPIITSPRFQ PQTRSPSHHH HDQHQHLSNP YPTTFVQADT STFKQVVQML TGSSTDTKTE NHHKAPSPVN NNKVGFSIPP
101: IKKTNSFKLY ERRQNNNNMF GKNNLMINTL RLQNSQRLMF SSGHNGQSPR FSPRNSSSEN VLLSPSMLDF PKLGLNSPVT PLRSNDDPFN KSSPLSLGSS
201: SEEDKAIAEK GFYLHPSPVS TPRDSQPLLL PLFPVTSPRN P
Best Arabidopsis Sequence Match ( AT5G53830.1 )
(BLAST)
001: MEVSTSSMSS KPEQMQNPPP MISSPRFQPQ IISPHHHDQH QHLSNPYPTT FVQADTSTFK QVVQMLTGSS TDTTTGKHHE APSPVNNNNK GSSFSIPPIK
101: KTNSFKLYER RQNNNNMFAK NDLMINTLRL QNSQRLMFTG GNSSHHQSPR FSPRNSSSSE NILLSPSMLD FPKLGLNSPV TPLRSNDDPF NKSSPLSLGN
201: SSEEDKAIAD KGFYLHPSPV STPRDSQPLL LPLFPVASPA RNS
Arabidopsis Description
VQ33VQ motif-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHZ3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.