Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14349 | Canola | nucleus | 99.12 | 92.59 |
| CDY65903 | Canola | nucleus | 80.18 | 85.45 |
| Bra022675.1-P | Field mustard | nucleus | 81.94 | 77.18 |
| AT5G53830.1 | Thale cress | nucleus | 75.33 | 70.37 |
| VIT_19s0014g02490.t01 | Wine grape | nucleus, plastid | 45.37 | 49.05 |
| Bra021096.1-P | Field mustard | nucleus, plastid | 46.26 | 48.61 |
| Bra027262.1-P | Field mustard | plastid | 47.58 | 48.0 |
| KRH27258 | Soybean | nucleus, plastid | 51.98 | 47.97 |
| KRH55250 | Soybean | nucleus, plastid | 51.1 | 47.54 |
| PGSC0003DMT400097260 | Potato | nucleus, plastid | 48.02 | 47.39 |
| KRH22072 | Soybean | nucleus, plastid | 51.1 | 46.59 |
| KRH38333 | Soybean | plastid | 40.53 | 46.0 |
| Solyc07g063070.1.1 | Tomato | nucleus, plastid | 47.14 | 45.92 |
| Bra010885.1-P | Field mustard | nucleus, plastid | 32.6 | 45.68 |
| KRH26132 | Soybean | nucleus, plastid | 49.78 | 45.56 |
| GSMUA_Achr8P27670_001 | Banana | plastid | 21.59 | 44.95 |
| Zm00001d008878_P001 | Maize | cytosol | 37.89 | 40.57 |
| HORVU3Hr1G026840.1 | Barley | plastid | 37.89 | 40.57 |
| TraesCS3A01G313700.1 | Wheat | plastid | 37.44 | 40.48 |
| TraesCS3D01G140600.1 | Wheat | plastid | 37.0 | 40.0 |
| TraesCS3B01G158200.1 | Wheat | plastid | 37.0 | 40.0 |
| Bra030082.1-P | Field mustard | nucleus, plastid | 42.73 | 39.75 |
| Zm00001d038810_P001 | Maize | plastid | 37.89 | 39.63 |
| TraesCS3B01G307300.1 | Wheat | nucleus, plastid | 39.65 | 38.96 |
| EES03601 | Sorghum | nucleus, plastid | 40.53 | 38.82 |
| EES00109 | Sorghum | cytosol, nucleus, plasma membrane, plastid | 37.44 | 38.81 |
| Os01t0201250-00 | Rice | plastid | 36.12 | 38.68 |
| Zm00001d010759_P001 | Maize | plastid | 37.44 | 38.64 |
| Zm00001d039428_P001 | Maize | plastid | 36.12 | 38.14 |
| GSMUA_Achr7P13760_001 | Banana | nucleus | 40.97 | 37.5 |
| TraesCS3A01G273600.1 | Wheat | nucleus, plastid | 39.21 | 37.4 |
| TraesCS3D01G272900.1 | Wheat | nucleus, plastid | 39.21 | 37.4 |
| TraesCS1B01G351200.1 | Wheat | plastid | 38.77 | 37.13 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 38.77 | 36.97 |
| GSMUA_Achr4P10440_001 | Banana | nucleus | 34.36 | 36.97 |
| Os01t0747800-01 | Rice | nucleus | 37.44 | 36.8 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.65 | 36.73 |
| GSMUA_Achr4P02580_001 | Banana | nucleus | 41.85 | 36.68 |
| TraesCS1D01G340900.1 | Wheat | plastid | 38.77 | 36.36 |
| TraesCS1A01G338700.1 | Wheat | plastid | 37.89 | 35.83 |
| Zm00001d043450_P001 | Maize | nucleus, plastid | 39.21 | 35.46 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.77 | 34.78 |
| GSMUA_Achr9P05800_001 | Banana | nucleus | 38.77 | 34.38 |
| Os05t0519000-00 | Rice | plastid | 40.53 | 34.07 |
| EES18519 | Sorghum | plastid | 37.44 | 33.6 |
| Bra005472.1-P | Field mustard | mitochondrion, plastid | 26.43 | 32.61 |
| Bra003566.1-P | Field mustard | nucleus | 24.23 | 31.79 |
| Bra035182.1-P | Field mustard | nucleus | 23.35 | 31.74 |
| Bra008473.1-P | Field mustard | nucleus | 22.91 | 31.71 |
| Bra009343.1-P | Field mustard | cytosol, plastid | 14.1 | 31.37 |
| HORVU1Hr1G076390.1 | Barley | plastid | 37.44 | 31.02 |
| HORVU3Hr1G071320.1 | Barley | plastid | 39.21 | 30.17 |
| Bra005995.1-P | Field mustard | cytosol, nucleus, plastid | 22.03 | 28.74 |
Protein Annotations
Description
AT5G53830 (E=9e-103) | VQ motif-containing protein
Coordinates
chrA10:+:5892964..5893647
Molecular Weight (calculated)
25281.7 Da
IEP (calculated)
10.644
GRAVY (calculated)
-0.803
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MQNPPPIISS PRFLQPQTRS LPHHEQHQHL SNPYPTTFVQ ADTSTFKQVV QMLTGSSSTD TNTGKHHEAP SPVNNNKGGF SIPPIKKTNS FKLYERRQNN
101: NNNMFAKNDL MINTLRLQNS QRLMFSSGNN VHQSPRFSPR NSSSENVLLS PSMLDFPKLG LNSPVTPLRS NNDPFNKSSP LSLGSSSEED KAIAEKGYFL
201: HPSPVSTPRD SQPLLLPLFP VTSPRNP
101: NNNMFAKNDL MINTLRLQNS QRLMFSSGNN VHQSPRFSPR NSSSENVLLS PSMLDFPKLG LNSPVTPLRS NNDPFNKSSP LSLGSSSEED KAIAEKGYFL
201: HPSPVSTPRD SQPLLLPLFP VTSPRNP
001: MEVSTSSMSS KPEQMQNPPP MISSPRFQPQ IISPHHHDQH QHLSNPYPTT FVQADTSTFK QVVQMLTGSS TDTTTGKHHE APSPVNNNNK GSSFSIPPIK
101: KTNSFKLYER RQNNNNMFAK NDLMINTLRL QNSQRLMFTG GNSSHHQSPR FSPRNSSSSE NILLSPSMLD FPKLGLNSPV TPLRSNDDPF NKSSPLSLGN
201: SSEEDKAIAD KGFYLHPSPV STPRDSQPLL LPLFPVASPA RNS
101: KTNSFKLYER RQNNNNMFAK NDLMINTLRL QNSQRLMFTG GNSSHHQSPR FSPRNSSSSE NILLSPSMLD FPKLGLNSPV TPLRSNDDPF NKSSPLSLGN
201: SSEEDKAIAD KGFYLHPSPV STPRDSQPLL LPLFPVASPA RNS
Arabidopsis Description
VQ33VQ motif-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.