Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 60.08 | 58.37 |
| GSMUA_Achr7P13760_001 | Banana | nucleus | 60.5 | 58.06 |
| GSMUA_Achr4P02580_001 | Banana | nucleus | 58.4 | 53.67 |
| GSMUA_Achr8P27670_001 | Banana | plastid | 23.53 | 51.38 |
| VIT_19s0014g02490.t01 | Wine grape | nucleus, plastid | 44.96 | 50.95 |
| KRH10893 | Soybean | nucleus | 41.6 | 49.75 |
| PGSC0003DMT400097260 | Potato | nucleus, plastid | 47.48 | 49.13 |
| GSMUA_AchrUn_... | Banana | nucleus | 52.1 | 49.01 |
| GSMUA_Achr4P10440_001 | Banana | nucleus | 43.28 | 48.82 |
| Solyc07g063070.1.1 | Tomato | nucleus, plastid | 47.48 | 48.5 |
| GSMUA_Achr9P05800_001 | Banana | nucleus | 50.84 | 47.27 |
| VIT_00s0527g00020.t01 | Wine grape | cytosol, nucleus, plastid | 31.51 | 45.73 |
| KRH27258 | Soybean | nucleus, plastid | 46.22 | 44.72 |
| KRH38333 | Soybean | plastid | 37.4 | 44.5 |
| CDY35728 | Canola | nucleus, plastid | 43.28 | 44.21 |
| Bra010885.1-P | Field mustard | nucleus, plastid | 29.83 | 43.83 |
| CDY37691 | Canola | plastid | 36.55 | 43.72 |
| CDX90141 | Canola | nucleus, plastid | 41.18 | 43.17 |
| Bra021096.1-P | Field mustard | nucleus, plastid | 38.24 | 42.13 |
| AT1G28280.1 | Thale cress | nucleus, plastid | 43.7 | 42.11 |
| CDX97648 | Canola | plastid | 39.08 | 41.89 |
| KRH22072 | Soybean | nucleus, plastid | 43.7 | 41.77 |
| KRH26132 | Soybean | nucleus, plastid | 43.28 | 41.53 |
| KRH55250 | Soybean | nucleus, plastid | 42.44 | 41.39 |
| Bra027262.1-P | Field mustard | plastid | 39.08 | 41.33 |
| CDY20126 | Canola | nucleus, plastid | 37.4 | 41.2 |
| AT3G15300.1 | Thale cress | nucleus, plastid | 37.82 | 41.1 |
| Solyc02g078030.1.1 | Tomato | nucleus, plastid | 45.38 | 41.06 |
| PGSC0003DMT400076377 | Potato | nucleus | 44.54 | 40.46 |
| CDY15683 | Canola | nucleus, plastid | 40.76 | 39.75 |
| Bra030082.1-P | Field mustard | nucleus, plastid | 40.76 | 39.75 |
| CDY32307 | Canola | nucleus | 36.97 | 39.64 |
| CDX96246 | Canola | nucleus | 35.29 | 39.62 |
| Bra003032.1-P | Field mustard | nucleus | 36.97 | 38.77 |
| KRH04611 | Soybean | plastid | 21.01 | 38.46 |
| KRH37938 | Soybean | mitochondrion | 21.01 | 38.17 |
| CDY65903 | Canola | nucleus | 34.03 | 38.03 |
| CDX94599 | Canola | nucleus, plastid | 39.5 | 37.9 |
| AT5G53830.1 | Thale cress | nucleus | 37.82 | 37.04 |
| Bra022675.1-P | Field mustard | nucleus | 37.4 | 36.93 |
| CDY14349 | Canola | nucleus | 37.4 | 36.63 |
| CDX96247 | Canola | nucleus | 36.55 | 35.95 |
| AT2G33780.1 | Thale cress | nucleus | 30.67 | 35.78 |
| KRH21417 | Soybean | nucleus | 39.08 | 35.77 |
| CDX98545 | Canola | plastid | 29.41 | 35.71 |
| Bra005472.1-P | Field mustard | mitochondrion, plastid | 27.31 | 35.33 |
| CDY17201 | Canola | plastid | 28.99 | 34.5 |
| KRH20439 | Soybean | nucleus, plastid | 39.5 | 33.45 |
| CDY27942 | Canola | nucleus | 27.73 | 33.0 |
| KRH50064 | Soybean | nucleus, plastid | 39.5 | 30.32 |
| GSMUA_Achr3P19850_001 | Banana | nucleus | 24.79 | 28.64 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P14110_001 | EnsemblPlants:GSMUA_Achr10T14110_001 | EnsemblPlantsGene:GSMUA_Achr10G14110_001 | InterPro:VQ | PANTHER:PTHR33402 | PANTHER:PTHR33402:SF9 |
| PFAM:PF05678 | SEG:seg | UniParc:UPI000294ABAE | UniProt:M0RI37 | MapMan:35.1 | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G14110_001]
Coordinates
chr10:-:22483722..22484438
Molecular Weight (calculated)
25125.9 Da
IEP (calculated)
10.466
GRAVY (calculated)
-0.431
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIDPKPRDA AITRSSSNYS STNGGAPAAK PPPSSPTALP PLTPQPIPRA CVANPCPTTF VHADASSFKQ VVQMLTGSAE TAAANSTAER SSVAPAAKVT
101: GPKKAAFKLY ERRSRVKNLK MIGPLIPTLL DSNPNSPVGG AAFSPRKLPE VPSPSTLDFP SLSLSPVTPL IPDPFERPPL RGTDSAKWAE DRAIAEKGFY
201: LHPSPRTARR DGQPPRLLPL FPVTSPKASS NSYPATCN
101: GPKKAAFKLY ERRSRVKNLK MIGPLIPTLL DSNPNSPVGG AAFSPRKLPE VPSPSTLDFP SLSLSPVTPL IPDPFERPPL RGTDSAKWAE DRAIAEKGFY
201: LHPSPRTARR DGQPPRLLPL FPVTSPKASS NSYPATCN
001: MENSPRYREA TNLIPSPRCH NSNNSCGMSS SSESNKPPTT PTRHVTTRSE SGNPYPTTFV QADTSSFKQV VQMLTGSAER PKHGSSLKPN PTHHQPDPRS
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSV NKR
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSV NKR
Arabidopsis Description
VQ4VQ motif-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q5M750]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.