Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g078030.1.1 | Tomato | nucleus, plastid | 91.98 | 91.64 |
| VIT_00s0527g00020.t01 | Wine grape | cytosol, nucleus, plastid | 38.17 | 60.98 |
| Bra010885.1-P | Field mustard | nucleus, plastid | 35.11 | 56.79 |
| KRH10893 | Soybean | nucleus | 43.13 | 56.78 |
| CDY35728 | Canola | nucleus, plastid | 48.47 | 54.51 |
| AT1G28280.1 | Thale cress | nucleus, plastid | 50.76 | 53.85 |
| Bra030082.1-P | Field mustard | nucleus, plastid | 50.0 | 53.69 |
| CDY15683 | Canola | nucleus, plastid | 50.0 | 53.69 |
| CDX94599 | Canola | nucleus, plastid | 50.0 | 52.82 |
| CDX90141 | Canola | nucleus, plastid | 45.42 | 52.42 |
| PGSC0003DMT400097260 | Potato | nucleus, plastid | 45.42 | 51.74 |
| CDY37691 | Canola | plastid | 38.17 | 50.25 |
| Os01t0747800-01 | Rice | nucleus | 40.84 | 46.32 |
| GSMUA_Achr8P27670_001 | Banana | plastid | 19.08 | 45.87 |
| GSMUA_Achr4P10440_001 | Banana | nucleus | 36.26 | 45.02 |
| Zm00001d010759_P001 | Maize | plastid | 37.79 | 45.0 |
| KRH20439 | Soybean | nucleus, plastid | 48.09 | 44.84 |
| KRH04611 | Soybean | plastid | 22.14 | 44.62 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 40.46 | 44.54 |
| EES03601 | Sorghum | nucleus, plastid | 39.69 | 43.88 |
| Zm00001d038810_P001 | Maize | plastid | 36.26 | 43.78 |
| TraesCS1B01G351200.1 | Wheat | plastid | 39.31 | 43.46 |
| TraesCS1D01G340900.1 | Wheat | plastid | 40.08 | 43.39 |
| TraesCS1A01G338700.1 | Wheat | plastid | 39.69 | 43.33 |
| TraesCS3A01G273600.1 | Wheat | nucleus, plastid | 39.31 | 43.28 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.46 | 43.27 |
| TraesCS3D01G272900.1 | Wheat | nucleus, plastid | 38.93 | 42.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.22 | 42.69 |
| TraesCS3B01G307300.1 | Wheat | nucleus, plastid | 37.4 | 42.42 |
| GSMUA_Achr7P13760_001 | Banana | nucleus | 40.08 | 42.34 |
| GSMUA_Achr4P02580_001 | Banana | nucleus | 41.6 | 42.08 |
| KRH37938 | Soybean | mitochondrion | 20.99 | 41.98 |
| KRH21417 | Soybean | nucleus | 41.6 | 41.92 |
| TraesCS3A01G313700.1 | Wheat | plastid | 33.59 | 41.9 |
| Zm00001d043450_P001 | Maize | nucleus, plastid | 40.08 | 41.83 |
| Os05t0519000-00 | Rice | plastid | 42.75 | 41.48 |
| Zm00001d039428_P001 | Maize | plastid | 33.97 | 41.4 |
| AT2G33780.1 | Thale cress | nucleus | 32.06 | 41.18 |
| EES00109 | Sorghum | cytosol, nucleus, plasma membrane, plastid | 34.35 | 41.1 |
| HORVU3Hr1G026840.1 | Barley | plastid | 33.21 | 41.04 |
| TraesCS3B01G158200.1 | Wheat | plastid | 32.82 | 40.95 |
| TraesCS3D01G140600.1 | Wheat | plastid | 32.82 | 40.95 |
| Zm00001d008878_P001 | Maize | cytosol | 32.82 | 40.57 |
| GSMUA_Achr9P05800_001 | Banana | nucleus | 38.55 | 39.45 |
| Os01t0201250-00 | Rice | plastid | 31.68 | 39.15 |
| Bra005472.1-P | Field mustard | mitochondrion, plastid | 27.1 | 38.59 |
| EES18519 | Sorghum | plastid | 37.02 | 38.34 |
| PGSC0003DMT400036669 | Potato | nucleus, plastid | 23.66 | 37.35 |
| KRH50064 | Soybean | nucleus, plastid | 43.89 | 37.1 |
| PGSC0003DMT400030219 | Potato | cytosol | 20.61 | 36.99 |
| HORVU1Hr1G076390.1 | Barley | plastid | 38.17 | 36.5 |
| CDY17201 | Canola | plastid | 27.48 | 36.0 |
| CDY27942 | Canola | nucleus | 26.72 | 35.0 |
| HORVU3Hr1G071320.1 | Barley | plastid | 38.55 | 34.24 |
| PGSC0003DMT400073731 | Potato | plastid | 20.61 | 32.73 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400076377 | EnsemblPlantsGene:PGSC0003DMG400029701 | EntrezGene:102586813 | InterPro:VQ | PANTHER:PTHR33402 | PANTHER:PTHR33402:SF9 |
| PFAM:PF05678 | PGSC:PGSC0003DMG400029701 | RefSeq:XP_006347024.1 | SEG:seg | UniParc:UPI0002948B0A | UniProt:M1CWM6 |
| MapMan:35.1 | : | : | : | : | : |
Description
DNA-binding WRKY; VQ [Source:PGSC_GENE;Acc:PGSC0003DMG400029701]
Coordinates
chr2:-:33797367..33799126
Molecular Weight (calculated)
28261.1 Da
IEP (calculated)
9.871
GRAVY (calculated)
-0.690
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: METLPKPQEF HSPCLISSPD SHSSNSSSCS NSSNSNHHHH HHNNGLHHHH RRHPTPPTTP TPTPPPPLPI TRSEPNNPYP TTFVQADASS FKQVVQMLTG
101: SSETAKVGAN SGRTEPVRNP IPPIKTGTKK EKSSSKLYER RNSMKNFKIS PLGPGVVNKS LFSAGFLGSP RTATPEILSP SILDFPALAL SPVTPLIPDP
201: FNRSPHSAAS TENLDLEAEE KAIATKGFFL HPSPASTPRE SEPRLLPLFP VTSPRVSGSS DS
101: SSETAKVGAN SGRTEPVRNP IPPIKTGTKK EKSSSKLYER RNSMKNFKIS PLGPGVVNKS LFSAGFLGSP RTATPEILSP SILDFPALAL SPVTPLIPDP
201: FNRSPHSAAS TENLDLEAEE KAIATKGFFL HPSPASTPRE SEPRLLPLFP VTSPRVSGSS DS
001: MENSPRYREA TNLIPSPRCH NSNNSCGMSS SSESNKPPTT PTRHVTTRSE SGNPYPTTFV QADTSSFKQV VQMLTGSAER PKHGSSLKPN PTHHQPDPRS
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSG SSSASTS
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSG SSSASTS
Arabidopsis Description
VQ4VQ motif-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q5M750]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.