Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- mitochondrion 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35728 | Canola | nucleus, plastid | 62.81 | 53.65 |
| CDX90141 | Canola | nucleus, plastid | 58.29 | 51.1 |
| AT2G33780.1 | Thale cress | nucleus | 51.26 | 50.0 |
| VIT_00s0527g00020.t01 | Wine grape | cytosol, nucleus, plastid | 39.7 | 48.17 |
| CDY17201 | Canola | plastid | 48.24 | 48.0 |
| CDY15683 | Canola | nucleus, plastid | 57.29 | 46.72 |
| KRH10893 | Soybean | nucleus | 46.23 | 46.23 |
| CDY27942 | Canola | nucleus | 46.23 | 46.0 |
| CDX94599 | Canola | nucleus, plastid | 56.78 | 45.56 |
| GSMUA_Achr8P27670_001 | Banana | plastid | 23.62 | 43.12 |
| KRH04611 | Soybean | plastid | 27.14 | 41.54 |
| KRH37938 | Soybean | mitochondrion | 27.14 | 41.22 |
| CDY20126 | Canola | nucleus, plastid | 42.71 | 39.35 |
| GSMUA_Achr4P10440_001 | Banana | nucleus | 41.71 | 39.34 |
| CDX97648 | Canola | plastid | 42.71 | 38.29 |
| PGSC0003DMT400076377 | Potato | nucleus | 50.25 | 38.17 |
| Solyc02g078030.1.1 | Tomato | nucleus, plastid | 49.25 | 37.26 |
| Zm00001d010759_P001 | Maize | plastid | 40.7 | 36.82 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 43.72 | 36.55 |
| CDY32307 | Canola | nucleus | 40.7 | 36.49 |
| Zm00001d038810_P001 | Maize | plastid | 39.7 | 36.41 |
| HORVU3Hr1G026840.1 | Barley | plastid | 38.69 | 36.32 |
| TraesCS3D01G140600.1 | Wheat | plastid | 38.19 | 36.19 |
| TraesCS3B01G158200.1 | Wheat | plastid | 38.19 | 36.19 |
| TraesCS3A01G313700.1 | Wheat | plastid | 38.19 | 36.19 |
| CDX96246 | Canola | nucleus | 38.19 | 35.85 |
| TraesCS1A01G338700.1 | Wheat | plastid | 42.71 | 35.42 |
| Os01t0201250-00 | Rice | plastid | 37.69 | 35.38 |
| CDX69949 | Canola | plastid | 26.63 | 35.33 |
| CDY65903 | Canola | nucleus | 37.69 | 35.21 |
| Os01t0747800-01 | Rice | nucleus | 40.7 | 35.06 |
| TraesCS1B01G351200.1 | Wheat | plastid | 41.71 | 35.02 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.22 | 34.78 |
| TraesCS3B01G307300.1 | Wheat | nucleus, plastid | 40.2 | 34.63 |
| Zm00001d008878_P001 | Maize | cytosol | 36.68 | 34.43 |
| TraesCS1D01G340900.1 | Wheat | plastid | 41.71 | 34.3 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.21 | 34.29 |
| EES03601 | Sorghum | nucleus, plastid | 40.7 | 34.18 |
| GSMUA_Achr9P05800_001 | Banana | nucleus | 43.72 | 33.98 |
| GSMUA_Achr4P02580_001 | Banana | nucleus | 44.22 | 33.98 |
| KRH20439 | Soybean | nucleus, plastid | 47.74 | 33.81 |
| GSMUA_Achr7P13760_001 | Banana | nucleus | 41.71 | 33.47 |
| EES00109 | Sorghum | cytosol, nucleus, plasma membrane, plastid | 36.68 | 33.33 |
| Zm00001d039428_P001 | Maize | plastid | 35.68 | 33.02 |
| CDY40742 | Canola | nucleus | 23.12 | 32.86 |
| TraesCS3D01G272900.1 | Wheat | nucleus, plastid | 39.2 | 32.77 |
| KRH21417 | Soybean | nucleus | 42.71 | 32.69 |
| CDY14349 | Canola | nucleus | 39.7 | 32.51 |
| TraesCS3A01G273600.1 | Wheat | nucleus, plastid | 38.69 | 32.35 |
| CDX67947 | Canola | nucleus | 26.63 | 32.32 |
| CDX98545 | Canola | plastid | 31.66 | 32.14 |
| CDX96247 | Canola | nucleus | 38.69 | 31.82 |
| CDX79386 | Canola | plastid | 27.14 | 31.4 |
| CDY39978 | Canola | nucleus | 26.13 | 31.14 |
| CDX87310 | Canola | nucleus | 26.13 | 31.14 |
| Os05t0519000-00 | Rice | plastid | 42.21 | 31.11 |
| Zm00001d043450_P001 | Maize | nucleus, plastid | 39.2 | 31.08 |
| HORVU1Hr1G076390.1 | Barley | plastid | 42.71 | 31.02 |
| EES18519 | Sorghum | plastid | 39.2 | 30.83 |
| KRH50064 | Soybean | nucleus, plastid | 45.23 | 29.03 |
| CDY37597 | Canola | nucleus | 23.62 | 28.66 |
| CDY62120 | Canola | mitochondrion, nucleus | 28.14 | 28.28 |
| HORVU3Hr1G071320.1 | Barley | plastid | 40.7 | 27.46 |
| CDX81107 | Canola | nucleus | 28.64 | 26.76 |
| CDY38669 | Canola | nucleus | 24.62 | 25.26 |
| CDY60233 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 29.65 | 24.69 |
Protein Annotations
| EnsemblPlants:CDY37691 | EnsemblPlantsGene:GSBRNA2T00064583001 | InterPro:VQ | PANTHER:PTHR33402 | PANTHER:PTHR33402:SF7 | PFAM:PF05678 |
| ProteinID:CDY37691 | ProteinID:CDY37691.1 | SEG:seg | UniParc:UPI0004EF3717 | UniProt:A0A078HJ42 | MapMan:35.1 |
Description
BnaA04g19770DBnaA04g19770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJ42]
Coordinates
chrLK032406:+:93437..94036
Molecular Weight (calculated)
21880.1 Da
IEP (calculated)
10.972
GRAVY (calculated)
-0.673
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNSPRYKDN AQSSLPSPSS ISSPTRHVTS MSERTTFFQT DASSFKQVVQ MLTGSSKKPN PNNKPKPRYS IPPVKASPSK KLSSSSSDFR LYERRNSKKH
101: LKIHPVHSGL PEKLSPSILD FPSLVLSPDT PLIPVPFIQT GSLNKSPSSN AEERAMKEKG FYLHPSPSTT PRVLEPRLLP LFPLTSPRVS DSVAASTTP
101: LKIHPVHSGL PEKLSPSILD FPSLVLSPDT PLIPVPFIQT GSLNKSPSSN AEERAMKEKG FYLHPSPSTT PRVLEPRLLP LFPLTSPRVS DSVAASTTP
001: MENSPRYREA TNLIPSPRCH NSNNSCGMSS SSESNKPPTT PTRHVTTRSE SGNPYPTTFV QADTSSFKQV VQMLTGSAER PKHGSSLKPN PTHHQPDPRS
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSG SSSASTS
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSG SSSASTS
Arabidopsis Description
VQ4VQ motif-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q5M750]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.