Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009343.1-P | Field mustard | cytosol, plastid | 33.33 | 64.71 |
| CDX69949 | Canola | plastid | 47.47 | 62.67 |
| CDY40742 | Canola | nucleus | 37.37 | 52.86 |
| CDX81107 | Canola | nucleus | 47.47 | 44.13 |
| KRH59700 | Soybean | nucleus | 41.41 | 44.09 |
| KRH41023 | Soybean | nucleus | 37.88 | 43.1 |
| PGSC0003DMT400030219 | Potato | cytosol | 29.29 | 39.73 |
| CDY60233 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 45.45 | 37.66 |
| Solyc12g088490.1.1 | Tomato | cytosol | 27.78 | 33.95 |
| CDX67947 | Canola | nucleus | 24.75 | 29.88 |
| CDX87310 | Canola | nucleus | 24.75 | 29.34 |
| CDY39978 | Canola | nucleus | 24.75 | 29.34 |
| CDY37691 | Canola | plastid | 28.28 | 28.14 |
| CDY37597 | Canola | nucleus | 23.23 | 28.05 |
| CDX79386 | Canola | plastid | 24.24 | 27.91 |
| CDX96246 | Canola | nucleus | 27.78 | 25.94 |
| CDY35728 | Canola | nucleus, plastid | 29.29 | 24.89 |
| CDY65903 | Canola | nucleus | 26.77 | 24.88 |
| CDX90141 | Canola | nucleus, plastid | 28.28 | 24.67 |
| CDY17201 | Canola | plastid | 24.24 | 24.0 |
| CDY15683 | Canola | nucleus, plastid | 29.29 | 23.77 |
| CDX97648 | Canola | plastid | 26.26 | 23.42 |
| CDX94599 | Canola | nucleus, plastid | 29.29 | 23.39 |
| CDY20126 | Canola | nucleus, plastid | 24.75 | 22.69 |
| CDY27942 | Canola | nucleus | 22.73 | 22.5 |
| CDY14349 | Canola | nucleus | 27.27 | 22.22 |
| CDX96247 | Canola | nucleus | 26.77 | 21.9 |
| CDY38669 | Canola | nucleus | 21.21 | 21.65 |
| CDY32307 | Canola | nucleus | 24.24 | 21.62 |
| CDX98545 | Canola | plastid | 17.68 | 17.86 |
Protein Annotations
| EnsemblPlants:CDY62120 | EnsemblPlantsGene:GSBRNA2T00035977001 | InterPro:VQ | PANTHER:PTHR33402 | PANTHER:PTHR33402:SF2 | PFAM:PF05678 |
| ProteinID:CDY62120 | ProteinID:CDY62120.1 | SEG:seg | UniParc:UPI0004EADA95 | UniProt:A0A078J9F8 | MapMan:35.1 |
Description
BnaCnng39230DBnaCnng39230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J9F8]
Coordinates
chrLK034101:+:23293..23889
Molecular Weight (calculated)
21804.9 Da
IEP (calculated)
10.407
GRAVY (calculated)
-0.814
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQVRGQKRN RCKSRPVLSE KNLHMNNQGS QNVATCKPVT TFVHTDTNTF REIVQRLTGP SENNAAAAVP EATAVKSATQ QKKPTTSKLH ERRQCMMRPK
101: LEIVKPPLSF KPSGTTPSSK SGNTNLLASP VGTPSSLLSN LSLIEGDKAD PDTEEEEEKA IKERRFYLHP SPRSKPGYTE PELLTLFPLT SPNSSGRP
101: LEIVKPPLSF KPSGTTPSSK SGNTNLLASP VGTPSSLLSN LSLIEGDKAD PDTEEEEEKA IKERRFYLHP SPRSKPGYTE PELLTLFPLT SPNSSGRP
001: MNSKGSQNVA TTCKPVTTFV QTDTNTFREI VQRLTGPTEN NAAAATPEAT VIKTAIQKRP TSKLHERRQC MRPKLEIVKP PLSFKPTGTT PSSKSGNTNL
101: LTSPVGTPSS LFSNLSLIEG EPDSCTTNIE EEEKAIKERR FYLHPSPRSK PGYTEPELLT LFPLTSPNSS GKP
101: LTSPVGTPSS LFSNLSLIEG EPDSCTTNIE EEEKAIKERR FYLHPSPRSK PGYTEPELLT LFPLTSPNSS GKP
Arabidopsis Description
VQ31VQ motif-containing protein 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP0]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.