Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027262.1-P | Field mustard | plastid | 72.96 | 63.56 |
| CDY20126 | Canola | nucleus, plastid | 68.88 | 62.5 |
| CDY32307 | Canola | nucleus | 69.39 | 61.26 |
| CDX97648 | Canola | plastid | 69.39 | 61.26 |
| AT3G15300.1 | Thale cress | nucleus, plastid | 61.73 | 55.25 |
| KRH22072 | Soybean | nucleus, plastid | 52.04 | 40.96 |
| VIT_19s0014g02490.t01 | Wine grape | nucleus, plastid | 43.88 | 40.95 |
| KRH27258 | Soybean | nucleus, plastid | 50.51 | 40.24 |
| KRH55250 | Soybean | nucleus, plastid | 48.98 | 39.34 |
| KRH26132 | Soybean | nucleus, plastid | 48.47 | 38.31 |
| KRH38333 | Soybean | plastid | 38.78 | 38.0 |
| PGSC0003DMT400097260 | Potato | nucleus, plastid | 44.39 | 37.83 |
| Solyc07g063070.1.1 | Tomato | nucleus, plastid | 43.88 | 36.91 |
| CDY14349 | Canola | nucleus | 45.41 | 36.63 |
| CDX96247 | Canola | nucleus | 43.88 | 35.54 |
| CDX90141 | Canola | nucleus, plastid | 40.82 | 35.24 |
| CDX96246 | Canola | nucleus | 37.76 | 34.91 |
| HORVU3Hr1G026840.1 | Barley | plastid | 37.24 | 34.43 |
| TraesCS3B01G158200.1 | Wheat | plastid | 36.73 | 34.29 |
| TraesCS3A01G313700.1 | Wheat | plastid | 36.73 | 34.29 |
| TraesCS3D01G140600.1 | Wheat | plastid | 36.73 | 34.29 |
| TraesCS3A01G273600.1 | Wheat | nucleus, plastid | 41.33 | 34.03 |
| CDY35728 | Canola | nucleus, plastid | 40.31 | 33.91 |
| CDY65903 | Canola | nucleus | 36.73 | 33.8 |
| TraesCS3D01G272900.1 | Wheat | nucleus, plastid | 40.82 | 33.61 |
| EES03601 | Sorghum | nucleus, plastid | 40.31 | 33.33 |
| Os01t0201250-00 | Rice | plastid | 35.71 | 33.02 |
| EES00109 | Sorghum | cytosol, nucleus, plasma membrane, plastid | 36.73 | 32.88 |
| CDY15683 | Canola | nucleus, plastid | 40.82 | 32.79 |
| Zm00001d008878_P001 | Maize | cytosol | 35.2 | 32.55 |
| Zm00001d038810_P001 | Maize | plastid | 35.71 | 32.26 |
| TraesCS1A01G338700.1 | Wheat | plastid | 39.29 | 32.08 |
| TraesCS3B01G307300.1 | Wheat | nucleus, plastid | 37.76 | 32.03 |
| Os01t0747800-01 | Rice | nucleus | 37.76 | 32.03 |
| CDX94599 | Canola | nucleus, plastid | 40.31 | 31.85 |
| GSMUA_Achr4P10440_001 | Banana | nucleus | 34.18 | 31.75 |
| CDY37691 | Canola | plastid | 32.14 | 31.66 |
| TraesCS1B01G351200.1 | Wheat | plastid | 38.27 | 31.65 |
| Zm00001d039428_P001 | Maize | plastid | 34.69 | 31.63 |
| TraesCS1D01G340900.1 | Wheat | plastid | 38.78 | 31.41 |
| GSMUA_Achr4P02580_001 | Banana | nucleus | 40.31 | 30.5 |
| Zm00001d043450_P001 | Maize | nucleus, plastid | 37.76 | 29.48 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 35.71 | 29.41 |
| GSMUA_Achr8P27670_001 | Banana | plastid | 16.33 | 29.36 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.22 | 28.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.24 | 28.85 |
| CDX67947 | Canola | nucleus | 23.98 | 28.66 |
| Zm00001d010759_P001 | Maize | plastid | 32.14 | 28.64 |
| GSMUA_Achr7P13760_001 | Banana | nucleus | 36.22 | 28.63 |
| GSMUA_Achr9P05800_001 | Banana | nucleus | 37.24 | 28.52 |
| EES18519 | Sorghum | plastid | 36.22 | 28.06 |
| CDY39978 | Canola | nucleus | 23.47 | 27.54 |
| Os05t0519000-00 | Rice | plastid | 37.24 | 27.04 |
| CDX87310 | Canola | nucleus | 22.96 | 26.95 |
| HORVU1Hr1G076390.1 | Barley | plastid | 37.24 | 26.64 |
| CDY37597 | Canola | nucleus | 21.43 | 25.61 |
| HORVU3Hr1G071320.1 | Barley | plastid | 38.27 | 25.42 |
| CDX69949 | Canola | plastid | 19.39 | 25.33 |
| CDY17201 | Canola | plastid | 25.51 | 25.0 |
| CDY27942 | Canola | nucleus | 25.0 | 24.5 |
| CDX79386 | Canola | plastid | 21.43 | 24.42 |
| CDY38669 | Canola | nucleus | 23.47 | 23.71 |
| CDY40742 | Canola | nucleus | 14.29 | 20.0 |
| CDY60233 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 21.94 | 17.99 |
| CDY62120 | Canola | mitochondrion, nucleus | 17.86 | 17.68 |
| CDX81107 | Canola | nucleus | 18.88 | 17.37 |
Protein Annotations
| EnsemblPlants:CDX98545 | EnsemblPlantsGene:GSBRNA2T00106195001 | InterPro:VQ | PANTHER:PTHR33402 | PANTHER:PTHR33402:SF6 | PFAM:PF05678 |
| ProteinID:CDX98545 | ProteinID:CDX98545.1 | SEG:seg | UniParc:UPI0004EDB421 | MapMan:35.1 | : |
Description
BnaC05g38300D
Coordinates
chrLK031905:-:885039..885716
Molecular Weight (calculated)
20938.4 Da
IEP (calculated)
9.823
GRAVY (calculated)
-0.728
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: METTTKPNPS STTSSSASSS IINGSLHHHI ITRSDHYPTT FVQADTSTFK QVVQMLTGTS SPRSPDSPRP PPSPSGKSTF VIPPVKTTQP KKHSGNKLYE
101: RRSNNSSLKN SLMINTLMIG GGNGAGSPRF SPRNQEILSP SCLDFPKLAL NSPVTPLKHG GDGNDGDPFD RMSPLSEEER AISEKVSAAS PDYSTS
101: RRSNNSSLKN SLMINTLMIG GGNGAGSPRF SPRNQEILSP SCLDFPKLAL NSPVTPLKHG GDGNDGDPFD RMSPLSEEER AISEKVSAAS PDYSTS
001: MEISTNPPSS SSSSVSSSII NGSLHHHIIT RSDHYPTTFV QADSSSFKQV VQMLTGSSSP RSPDSPRPPT TPSGKGNFVI PPIKTAQPKK HSGNKLYERR
101: SHGGFNNNLK NSLMINTLMI GGGGAGSPRF SPRNQEILSP SCLDFPKLAL NSPVTPLKQG TNGNEGDPFD KMSPLSEEER GIADKGYYLH RSPISTPRDS
201: EPQLLPLFPV TSPRLSPEM
101: SHGGFNNNLK NSLMINTLMI GGGGAGSPRF SPRNQEILSP SCLDFPKLAL NSPVTPLKQG TNGNEGDPFD KMSPLSEEER GIADKGYYLH RSPISTPRDS
201: EPQLLPLFPV TSPRLSPEM
Arabidopsis Description
VQ19VQ motif-containing protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDZ1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.