Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G351200.1 | Wheat | plastid | 83.47 | 85.23 |
| TraesCS1A01G338700.1 | Wheat | plastid | 76.03 | 76.67 |
| Zm00001d010759_P001 | Maize | plastid | 57.44 | 63.18 |
| Zm00001d038810_P001 | Maize | plastid | 54.96 | 61.29 |
| HORVU1Hr1G076390.1 | Barley | plastid | 67.36 | 59.49 |
| EES18519 | Sorghum | plastid | 61.16 | 58.5 |
| TraesCS3D01G272900.1 | Wheat | nucleus, plastid | 57.44 | 58.4 |
| Os05t0519000-00 | Rice | plastid | 59.09 | 52.96 |
| VIT_19s0014g02490.t01 | Wine grape | nucleus, plastid | 42.98 | 49.52 |
| GSMUA_Achr4P10440_001 | Banana | nucleus | 41.74 | 47.87 |
| KRH10893 | Soybean | nucleus | 39.26 | 47.74 |
| TraesCS3D01G140600.1 | Wheat | plastid | 41.32 | 47.62 |
| Solyc07g063070.1.1 | Tomato | nucleus, plastid | 44.63 | 46.35 |
| VIT_00s0527g00020.t01 | Wine grape | cytosol, nucleus, plastid | 31.41 | 46.34 |
| PGSC0003DMT400097260 | Potato | nucleus, plastid | 43.8 | 46.09 |
| Bra010885.1-P | Field mustard | nucleus, plastid | 30.17 | 45.06 |
| CDX90141 | Canola | nucleus, plastid | 40.08 | 42.73 |
| CDY35728 | Canola | nucleus, plastid | 40.91 | 42.49 |
| KRH27258 | Soybean | nucleus, plastid | 42.56 | 41.87 |
| KRH22072 | Soybean | nucleus, plastid | 42.98 | 41.77 |
| CDY37691 | Canola | plastid | 34.3 | 41.71 |
| CDX96246 | Canola | nucleus | 36.36 | 41.51 |
| KRH38333 | Soybean | plastid | 34.3 | 41.5 |
| CDY32307 | Canola | nucleus | 38.02 | 41.44 |
| Bra021096.1-P | Field mustard | nucleus, plastid | 36.78 | 41.2 |
| CDY20126 | Canola | nucleus, plastid | 36.36 | 40.74 |
| CDY15683 | Canola | nucleus, plastid | 40.5 | 40.16 |
| Bra030082.1-P | Field mustard | nucleus, plastid | 40.5 | 40.16 |
| CDX97648 | Canola | plastid | 36.78 | 40.09 |
| PGSC0003DMT400076377 | Potato | nucleus | 43.39 | 40.08 |
| KRH55250 | Soybean | nucleus, plastid | 40.08 | 39.75 |
| AT1G28280.1 | Thale cress | nucleus, plastid | 40.5 | 39.68 |
| Bra027262.1-P | Field mustard | plastid | 36.78 | 39.56 |
| KRH26132 | Soybean | nucleus, plastid | 40.5 | 39.52 |
| CDY65903 | Canola | nucleus | 34.71 | 39.44 |
| Solyc02g078030.1.1 | Tomato | nucleus, plastid | 42.15 | 38.78 |
| CDX98545 | Canola | plastid | 31.41 | 38.78 |
| Bra003032.1-P | Field mustard | nucleus | 36.36 | 38.77 |
| CDX94599 | Canola | nucleus, plastid | 39.67 | 38.71 |
| AT5G53830.1 | Thale cress | nucleus | 38.84 | 38.68 |
| Bra022675.1-P | Field mustard | nucleus | 38.02 | 38.17 |
| CDY14349 | Canola | nucleus | 37.6 | 37.45 |
| AT3G15300.1 | Thale cress | nucleus, plastid | 33.88 | 37.44 |
| KRH37938 | Soybean | mitochondrion | 20.25 | 37.4 |
| CDX96247 | Canola | nucleus | 36.78 | 36.78 |
| KRH04611 | Soybean | plastid | 19.42 | 36.15 |
| AT2G33780.1 | Thale cress | nucleus | 30.17 | 35.78 |
| KRH20439 | Soybean | nucleus, plastid | 40.91 | 35.23 |
| KRH21417 | Soybean | nucleus | 37.19 | 34.62 |
| Bra005472.1-P | Field mustard | mitochondrion, plastid | 24.38 | 32.07 |
| KRH50064 | Soybean | nucleus, plastid | 40.91 | 31.94 |
| CDY17201 | Canola | plastid | 25.21 | 30.5 |
| CDY27942 | Canola | nucleus | 24.79 | 30.0 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G340900.1 | EnsemblPlantsGene:TraesCS1D01G340900 | InterPro:VQ | PANTHER:PTHR33402 | PANTHER:PTHR33402:SF8 | PFAM:PF05678 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:430481424..430482152
Molecular Weight (calculated)
25040.0 Da
IEP (calculated)
11.233
GRAVY (calculated)
-0.319
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVAAPKQLL PMAPRDPNSP SSSTSSSSPS SAASPSHHRP SPLPPSPRPV PRTIDTTPFP TTFVQADTAS FKQVVQMLTG ADMPPPAPSL QPQAQAQRPP
101: AAANSKAGAP CRPKKPAFKL YERRSSMKNL KMIAPLAMAA AAGASPRKAL PELLSPSVLD FPSLALSPVT PLVSDPFNRS ASASPAEQEA AAERAAIARK
201: GFFLHPSPRG GAGEPPPRLL PLFPVTSPRM ASASAAAAPS SE
101: AAANSKAGAP CRPKKPAFKL YERRSSMKNL KMIAPLAMAA AAGASPRKAL PELLSPSVLD FPSLALSPVT PLVSDPFNRS ASASPAEQEA AAERAAIARK
201: GFFLHPSPRG GAGEPPPRLL PLFPVTSPRM ASASAAAAPS SE
001: MEKSPRYRDK AKNLLPSPSS CTTTPTRYVK DDMYETTFIR TDPSSFKQVV QLLTGIPKNP THQPDPRFPP FHSIPPIKAV TNKKQSSSFR LSERRNSMKH
101: YLNINPTHSG PPEILTPTIL NFPALDLSPD TPLMSDPFYR PGSFSQSPSD SKPSFDDDQE RSIKEKGFYL RPSPSTTPRD TEPRLLSLFP MTPIHSPAPS
201: PHDH
101: YLNINPTHSG PPEILTPTIL NFPALDLSPD TPLMSDPFYR PGSFSQSPSD SKPSFDDDQE RSIKEKGFYL RPSPSTTPRD TEPRLLSLFP MTPIHSPAPS
201: PHDH
Arabidopsis Description
VQ13VQ motif-containing protein 13 [Source:UniProtKB/Swiss-Prot;Acc:O23660]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.