Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G273600.1 | Wheat | nucleus, plastid | 98.74 | 98.74 |
| TraesCS3B01G307300.1 | Wheat | nucleus, plastid | 86.13 | 88.74 |
| EES03601 | Sorghum | nucleus, plastid | 65.13 | 65.4 |
| Zm00001d043450_P001 | Maize | nucleus, plastid | 63.87 | 60.56 |
| Os01t0747800-01 | Rice | nucleus | 57.14 | 58.87 |
| TraesCS1D01G340900.1 | Wheat | plastid | 58.4 | 57.44 |
| HORVU3Hr1G071320.1 | Barley | plastid | 71.01 | 57.29 |
| PGSC0003DMT400097260 | Potato | nucleus, plastid | 47.06 | 48.7 |
| Solyc07g063070.1.1 | Tomato | nucleus, plastid | 47.06 | 48.07 |
| TraesCS3D01G140600.1 | Wheat | plastid | 42.02 | 47.62 |
| VIT_19s0014g02490.t01 | Wine grape | nucleus, plastid | 42.02 | 47.62 |
| KRH10893 | Soybean | nucleus | 37.4 | 44.72 |
| GSMUA_Achr4P10440_001 | Banana | nucleus | 39.5 | 44.55 |
| CDX90141 | Canola | nucleus, plastid | 41.18 | 43.17 |
| KRH38333 | Soybean | plastid | 34.87 | 41.5 |
| KRH27258 | Soybean | nucleus, plastid | 42.86 | 41.46 |
| Bra010885.1-P | Field mustard | nucleus, plastid | 28.15 | 41.36 |
| Bra021096.1-P | Field mustard | nucleus, plastid | 37.4 | 41.2 |
| CDX96246 | Canola | nucleus | 36.55 | 41.04 |
| CDX97648 | Canola | plastid | 38.24 | 40.99 |
| KRH55250 | Soybean | nucleus, plastid | 42.02 | 40.98 |
| CDX98545 | Canola | plastid | 33.61 | 40.82 |
| CDY35728 | Canola | nucleus, plastid | 39.92 | 40.77 |
| CDY20126 | Canola | nucleus, plastid | 36.97 | 40.74 |
| KRH26132 | Soybean | nucleus, plastid | 42.44 | 40.73 |
| KRH22072 | Soybean | nucleus, plastid | 42.44 | 40.56 |
| CDY32307 | Canola | nucleus | 37.82 | 40.54 |
| Bra027262.1-P | Field mustard | plastid | 38.24 | 40.44 |
| VIT_00s0527g00020.t01 | Wine grape | cytosol, nucleus, plastid | 27.73 | 40.24 |
| Solyc02g078030.1.1 | Tomato | nucleus, plastid | 44.12 | 39.92 |
| AT3G15300.1 | Thale cress | nucleus, plastid | 36.55 | 39.73 |
| CDY65903 | Canola | nucleus | 35.29 | 39.44 |
| Bra003032.1-P | Field mustard | nucleus | 37.4 | 39.21 |
| CDY37691 | Canola | plastid | 32.77 | 39.2 |
| PGSC0003DMT400076377 | Potato | nucleus | 42.86 | 38.93 |
| AT5G53830.1 | Thale cress | nucleus | 39.08 | 38.27 |
| Bra022675.1-P | Field mustard | nucleus | 38.66 | 38.17 |
| CDY14349 | Canola | nucleus | 38.24 | 37.45 |
| CDY15683 | Canola | nucleus, plastid | 38.24 | 37.3 |
| Bra030082.1-P | Field mustard | nucleus, plastid | 38.24 | 37.3 |
| AT1G28280.1 | Thale cress | nucleus, plastid | 38.66 | 37.25 |
| CDX96247 | Canola | nucleus | 37.82 | 37.19 |
| CDX94599 | Canola | nucleus, plastid | 37.82 | 36.29 |
| KRH21417 | Soybean | nucleus | 38.66 | 35.38 |
| AT2G33780.1 | Thale cress | nucleus | 30.25 | 35.29 |
| KRH20439 | Soybean | nucleus, plastid | 40.76 | 34.52 |
| KRH04611 | Soybean | plastid | 18.49 | 33.85 |
| Bra005472.1-P | Field mustard | mitochondrion, plastid | 25.21 | 32.61 |
| KRH50064 | Soybean | nucleus, plastid | 41.6 | 31.94 |
| KRH37938 | Soybean | mitochondrion | 16.81 | 30.53 |
| CDY17201 | Canola | plastid | 25.21 | 30.0 |
| CDY27942 | Canola | nucleus | 24.37 | 29.0 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G272900.1 | EnsemblPlantsGene:TraesCS3D01G272900 | InterPro:VQ | PANTHER:PTHR33402 | PANTHER:PTHR33402:SF8 | PFAM:PF05678 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:378529330..378530046
Molecular Weight (calculated)
24786.1 Da
IEP (calculated)
10.362
GRAVY (calculated)
-0.464
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPCTKQFLP MPPQDPNSPS SSTSSSSSSS TSPSHPYHRA QPPHPHNLPP SPRPVPRTIE TTPFPTTFVQ ADTTSFKQVV QMLTGSEQSS KSAAAATTNG
101: SAGNQAASGS GPCRPKKPSF KLYERRSSLK NLKMIAPLAM GAPPSTRNAS AAPEILSPSV LDFPSLKLSS PVTPLTGDPF FPSPASSSGD AAERAAIADK
201: GFFFHPSPRG AEPPRLLPLF PVSSPRMAAA SATAAPAE
101: SAGNQAASGS GPCRPKKPSF KLYERRSSLK NLKMIAPLAM GAPPSTRNAS AAPEILSPSV LDFPSLKLSS PVTPLTGDPF FPSPASSSGD AAERAAIADK
201: GFFFHPSPRG AEPPRLLPLF PVSSPRMAAA SATAAPAE
001: MENSPRYREA TNLIPSPRCH NSNNSCGMSS SSESNKPPTT PTRHVTTRSE SGNPYPTTFV QADTSSFKQV VQMLTGSAER PKHGSSLKPN PTHHQPDPRS
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSV NKR
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSV NKR
Arabidopsis Description
VQ4VQ motif-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q5M750]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.