CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010759_P001	Maize	plastid	57.31	65.91
TraesCS1A01G338700.1	Wheat	plastid	61.26	64.58
TraesCS1B01G351200.1	Wheat	plastid	60.08	64.14
Zm00001d038810_P001	Maize	plastid	54.15	63.13
TraesCS1D01G340900.1	Wheat	plastid	58.5	61.16
EES03601	Sorghum	nucleus, plastid	52.57	56.12
Os05t0519000-00	Rice	plastid	57.31	53.7
HORVU1Hr1G076390.1	Barley	plastid	56.13	51.82
VIT_19s0014g02490.t01	Wine grape	nucleus, plastid	39.13	47.14
EES00109	Sorghum	cytosol, nucleus, plasma membrane, plastid	39.92	46.12
GSMUA_Achr4P10440_001	Banana	nucleus	36.76	44.08
PGSC0003DMT400097260	Potato	nucleus, plastid	39.92	43.91
Solyc07g063070.1.1	Tomato	nucleus, plastid	40.32	43.78
KRH10893	Soybean	nucleus	34.39	43.72
VIT_00s0527g00020.t01	Wine grape	cytosol, nucleus, plastid	28.06	43.29
Bra010885.1-P	Field mustard	nucleus, plastid	27.67	43.21
KRH26132	Soybean	nucleus, plastid	41.9	42.74
KRH55250	Soybean	nucleus, plastid	40.71	42.21
CDX96246	Canola	nucleus	35.18	41.98
CDX90141	Canola	nucleus, plastid	37.55	41.85
CDY35728	Canola	nucleus, plastid	38.34	41.63
KRH27258	Soybean	nucleus, plastid	39.92	41.06
KRH22072	Soybean	nucleus, plastid	39.53	40.16
KRH38333	Soybean	plastid	31.62	40.0
CDY37691	Canola	plastid	30.83	39.2
CDY65903	Canola	nucleus	32.81	38.97
Bra021096.1-P	Field mustard	nucleus, plastid	33.2	38.89
Bra030082.1-P	Field mustard	nucleus, plastid	37.15	38.52
CDY15683	Canola	nucleus, plastid	37.15	38.52
AT1G28280.1	Thale cress	nucleus, plastid	37.55	38.46
CDY20126	Canola	nucleus, plastid	32.81	38.43
CDY32307	Canola	nucleus	33.6	38.29
Solyc02g078030.1.1	Tomato	nucleus, plastid	39.53	38.02
Bra022675.1-P	Field mustard	nucleus	35.97	37.76
CDX94599	Canola	nucleus, plastid	36.76	37.5
Bra003032.1-P	Field mustard	nucleus	33.6	37.44
CDX96247	Canola	nucleus	35.57	37.19
PGSC0003DMT400076377	Potato	nucleus	38.34	37.02
AT3G15300.1	Thale cress	nucleus, plastid	32.02	36.99
KRH04611	Soybean	plastid	18.97	36.92
AT2G33780.1	Thale cress	nucleus	29.25	36.27
CDX98545	Canola	plastid	28.06	36.22
CDY14349	Canola	nucleus	34.78	36.21
AT5G53830.1	Thale cress	nucleus	34.78	36.21
CDX97648	Canola	plastid	31.62	36.04
Bra027262.1-P	Field mustard	plastid	31.62	35.56
KRH37938	Soybean	mitochondrion	18.18	35.11
Bra005472.1-P	Field mustard	mitochondrion, plastid	24.9	34.24
KRH20439	Soybean	nucleus, plastid	36.76	33.1
KRH21417	Soybean	nucleus	33.99	33.08
CDY17201	Canola	plastid	25.69	32.5
CDY27942	Canola	nucleus	25.69	32.5
KRH50064	Soybean	nucleus, plastid	37.55	30.65

Protein Annotations

EnsemblPlants:EES18519	EnsemblPlantsGene:SORBI_3009G200700	EntrezGene:8082986	InterPro:VQ	PANTHER:PTHR33402	PANTHER:PTHR33402:SF9
PFAM:PF05678	PFscan:PS51257	ProteinID:EES18519	ProteinID:EES18519.1	RefSeq:XP_002440089.1	SEG:seg
unigene:Sbi.8611	UniParc:UPI0001A88BE1	UniProt:C5Z1A6	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr9:+:55054074..55055883

Molecular Weight (calculated)

26166.1 Da

IEP (calculated)

11.047

GRAVY (calculated)

-0.393

Length

253 amino acids

Sequence
(BLAST)

001: MEVAAAKQLL PMARGVPNSP SSSTSSSSPS SAACASPSPR QQSQAPVPPS PKPVPRIIDT TPFPTTFVQA DTANFKQVVQ RLTGSDTPPT PAAAQQKPAK
101: SSHGHHHHHH HHHHGGGSGL ASGPKKPAFK LYERRIGKNN LKMIAPLAMA AAAAAGASPR KAAPEVLSPS VLDFPSLALG SPVTPLLSDP FNRSPPSAGE
201: EDEAAERAAI ARKGFFLHPS PRAAAEPPRL LPLFPVTSPR VAPSPAAAPS PLQ

Best Arabidopsis Sequence Match ( AT1G28280.2 )
(BLAST)

001: MENSPRYREA TNLIPSPRCH NSNNSCGMSS SSESNKPPTT PTRHVTTRSE SGNPYPTTFV QADTSSFKQV VQMLTGSAER PKHGSSLKPN PTHHQPDPRS
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSV NKR

Arabidopsis Description

VQ4VQ motif-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q5M750]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.