Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 58.1 | 60.0 |
| GSMUA_Achr8P27670_001 | Banana | plastid | 24.51 | 56.88 |
| GSMUA_Achr7P13760_001 | Banana | nucleus | 54.94 | 56.05 |
| GSMUA_Achr4P10440_001 | Banana | nucleus | 43.87 | 52.61 |
| VIT_00s0527g00020.t01 | Wine grape | cytosol, nucleus, plastid | 33.99 | 52.44 |
| TraesCS3A01G313700.1 | Wheat | plastid | 43.48 | 52.38 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 49.01 | 52.1 |
| GSMUA_Achr4P02580_001 | Banana | nucleus | 52.96 | 51.74 |
| TraesCS3D01G140600.1 | Wheat | plastid | 42.69 | 51.43 |
| TraesCS3B01G158200.1 | Wheat | plastid | 42.69 | 51.43 |
| HORVU3Hr1G026840.1 | Barley | plastid | 41.9 | 50.0 |
| KRH10893 | Soybean | nucleus | 39.13 | 49.75 |
| Zm00001d039428_P001 | Maize | plastid | 41.9 | 49.3 |
| EES00109 | Sorghum | cytosol, nucleus, plasma membrane, plastid | 42.29 | 48.86 |
| VIT_19s0014g02490.t01 | Wine grape | nucleus, plastid | 40.32 | 48.57 |
| Zm00001d008878_P001 | Maize | cytosol | 39.92 | 47.64 |
| GSMUA_Achr9P05800_001 | Banana | nucleus | 47.83 | 47.27 |
| Os01t0201250-00 | Rice | plastid | 39.13 | 46.7 |
| Bra010885.1-P | Field mustard | nucleus, plastid | 29.64 | 46.3 |
| PGSC0003DMT400097260 | Potato | nucleus, plastid | 41.9 | 46.09 |
| Solyc07g063070.1.1 | Tomato | nucleus, plastid | 42.29 | 45.92 |
| AT1G28280.1 | Thale cress | nucleus, plastid | 44.66 | 45.75 |
| CDY35728 | Canola | nucleus, plastid | 41.9 | 45.49 |
| Bra030082.1-P | Field mustard | nucleus, plastid | 43.08 | 44.67 |
| CDY15683 | Canola | nucleus, plastid | 43.08 | 44.67 |
| CDY37691 | Canola | plastid | 34.78 | 44.22 |
| KRH22072 | Soybean | nucleus, plastid | 43.48 | 44.18 |
| Bra021096.1-P | Field mustard | nucleus, plastid | 37.15 | 43.52 |
| KRH38333 | Soybean | plastid | 34.39 | 43.5 |
| CDX90141 | Canola | nucleus, plastid | 38.74 | 43.17 |
| CDX94599 | Canola | nucleus, plastid | 42.29 | 43.15 |
| CDY20126 | Canola | nucleus, plastid | 36.76 | 43.06 |
| CDX96246 | Canola | nucleus | 35.97 | 42.92 |
| KRH27258 | Soybean | nucleus, plastid | 41.11 | 42.28 |
| CDX97648 | Canola | plastid | 36.76 | 41.89 |
| Bra027262.1-P | Field mustard | plastid | 36.76 | 41.33 |
| PGSC0003DMT400076377 | Potato | nucleus | 42.69 | 41.22 |
| CDY32307 | Canola | nucleus | 35.97 | 40.99 |
| KRH55250 | Soybean | nucleus, plastid | 39.13 | 40.57 |
| Solyc02g078030.1.1 | Tomato | nucleus, plastid | 41.9 | 40.3 |
| KRH26132 | Soybean | nucleus, plastid | 39.13 | 39.92 |
| KRH37938 | Soybean | mitochondrion | 20.55 | 39.69 |
| CDY65903 | Canola | nucleus | 33.2 | 39.44 |
| AT3G15300.1 | Thale cress | nucleus, plastid | 33.6 | 38.81 |
| Bra003032.1-P | Field mustard | nucleus | 34.78 | 38.77 |
| AT2G33780.1 | Thale cress | nucleus | 31.23 | 38.73 |
| Bra022675.1-P | Field mustard | nucleus | 36.76 | 38.59 |
| KRH21417 | Soybean | nucleus | 39.53 | 38.46 |
| KRH04611 | Soybean | plastid | 19.37 | 37.69 |
| CDX98545 | Canola | plastid | 28.85 | 37.24 |
| CDX96247 | Canola | nucleus | 35.57 | 37.19 |
| CDY14349 | Canola | nucleus | 35.18 | 36.63 |
| AT5G53830.1 | Thale cress | nucleus | 34.39 | 35.8 |
| KRH20439 | Soybean | nucleus, plastid | 38.74 | 34.88 |
| Bra005472.1-P | Field mustard | mitochondrion, plastid | 24.11 | 33.15 |
| KRH50064 | Soybean | nucleus, plastid | 39.13 | 31.94 |
| CDY27942 | Canola | nucleus | 24.9 | 31.5 |
| CDY17201 | Canola | plastid | 24.9 | 31.5 |
| GSMUA_Achr3P19850_001 | Banana | nucleus | 20.95 | 25.73 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP21630_001 | EnsemblPlants:GSMUA_AchrUn_randomT21630_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG21630_001 | InterPro:VQ | PANTHER:PTHR33402 | PANTHER:PTHR33402:SF9 |
| PFAM:PF05678 | SEG:seg | UniParc:UPI000296C0BC | UniProt:M0UB71 | MapMan:35.1 | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG21630_001]
Coordinates
chrchrUn_random:-:105894805..105895679
Molecular Weight (calculated)
26654.4 Da
IEP (calculated)
10.077
GRAVY (calculated)
-0.361
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MESHPKARET FGSSSSNYSC TNGTTTAAAP PSSSPPAPPP LTPKSVARDG EVNPYQTTFV QADTSSFKQV VQMLTGSAET VAATATAAAA AAATNSTARK
101: APVAPAAKAT GPKKPAFKLY ERRNSLKNLK ILSPLIPTFF NSNPNSPVTA AGFSPRKQPE ILSPSILDFP SLVLSPVTPL IPDPFNRPPH PNSEAAKWAE
201: DRAIAEKGFY LHPSPRASTE ADPPRLLPLF PVTSPEVSSD LSLAIPRSST REV
101: APVAPAAKAT GPKKPAFKLY ERRNSLKNLK ILSPLIPTFF NSNPNSPVTA AGFSPRKQPE ILSPSILDFP SLVLSPVTPL IPDPFNRPPH PNSEAAKWAE
201: DRAIAEKGFY LHPSPRASTE ADPPRLLPLF PVTSPEVSSD LSLAIPRSST REV
001: MENSPRYREA TNLIPSPRCH NSNNSCGMSS SSESNKPPTT PTRHVTTRSE SGNPYPTTFV QADTSSFKQV VQMLTGSAER PKHGSSLKPN PTHHQPDPRS
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSV NKR
101: TPSSFSIPPI KAVPNKKQSS SSASGFRLYE RRNSMKNLKI NPLNPVFNPV NSAFSPRKPE ILSPSILDFP SLVLSPVTPL IPDPFDRSGS SNQSPNELAA
201: EEKAMKERGF YLHPSPATTP MDPEPRLLPL FPVTSPRVSV NKR
Arabidopsis Description
VQ4VQ motif-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q5M750]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.