Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400030219 | Potato | cytosol | 58.64 | 65.07 |
| CDX69949 | Canola | plastid | 33.33 | 36.0 |
| Solyc03g117500.1.1 | Tomato | plastid | 35.19 | 33.93 |
| KRH41023 | Soybean | nucleus | 35.8 | 33.33 |
| AT5G08480.2 | Thale cress | cytosol, plastid | 35.19 | 32.95 |
| Bra009343.1-P | Field mustard | cytosol, plastid | 20.37 | 32.35 |
| Bra005995.1-P | Field mustard | cytosol, nucleus, plastid | 33.95 | 31.61 |
| CDY40742 | Canola | nucleus | 27.16 | 31.43 |
| KRH59700 | Soybean | nucleus | 33.95 | 29.57 |
| CDY62120 | Canola | mitochondrion, nucleus | 33.95 | 27.78 |
| CDX81107 | Canola | nucleus | 33.33 | 25.35 |
| Solyc12g042730.1.1 | Tomato | nucleus, plastid | 26.54 | 25.0 |
| CDY60233 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 33.95 | 23.01 |
| Solyc07g063070.1.1 | Tomato | nucleus, plastid | 32.1 | 22.32 |
| Solyc02g078030.1.1 | Tomato | nucleus, plastid | 32.72 | 20.15 |
Protein Annotations
| EnsemblPlants:Solyc12g088490.1.1 | EnsemblPlantsGene:Solyc12g088490.1 | InterPro:VQ | PANTHER:PTHR33402 | PANTHER:PTHR33402:SF2 | PFAM:PF05678 |
| SEG:seg | UniParc:UPI000276AB59 | UniProt:K4DGS0 | MapMan:35.2 | : | : |
Description
VQ motif-containing protein 31 [Source:Projected from Arabidopsis thaliana (AT5G08480) UniProtKB/Swiss-Prot;Acc:Q9FNP0]
Coordinates
chr12:-:63836570..63837058
Molecular Weight (calculated)
18584.1 Da
IEP (calculated)
8.355
GRAVY (calculated)
-0.685
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMTTIHTRL SKEMTTFVQA DLSCFREVVQ RLTGTSECID GNLEIAAATN ISKAQKQHNT SKLHHRRQCR RPDIEITNSQ FQPIIIPSPS TRSNKRASPS
101: IETINKVEEE KAIKERRFYL HTSPRSKHGN AEEPELLTLL PLISPRETMD REQSVEGFCF FS
101: IETINKVEEE KAIKERRFYL HTSPRSKHGN AEEPELLTLL PLISPRETMD REQSVEGFCF FS
001: MNSKGSQNVA TTCKPVTTFV QTDTNTFREI VQRLTGPTEN NAAAATPEAT VIKTAIQKRP TSKLHERRQC MRPKLEIVKP PLSFKPTEGE PDSCTTNIEE
101: EEKAIKERRF YLHPSPRSKP GYTEPELLTL FPLTSPNSSG KP
101: EEKAIKERRF YLHPSPRSKP GYTEPELLTL FPLTSPNSSG KP
Arabidopsis Description
VQ31VQ motif-containing protein 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP0]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.