Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 6
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g117500.1.1 | Tomato | plastid | 47.85 | 52.98 |
| PGSC0003DMT400036669 | Potato | nucleus, plastid | 45.7 | 51.2 |
| KRH47420 | Soybean | plastid | 44.09 | 42.49 |
| KRH44484 | Soybean | plastid | 43.01 | 41.24 |
| Bra008473.1-P | Field mustard | nucleus | 34.41 | 39.02 |
| CDX67947 | Canola | nucleus | 34.41 | 39.02 |
| CDY37597 | Canola | nucleus | 34.41 | 39.02 |
| CDX87310 | Canola | nucleus | 34.95 | 38.92 |
| CDY39978 | Canola | nucleus | 34.41 | 38.32 |
| Bra035182.1-P | Field mustard | nucleus | 33.87 | 37.72 |
| AT1G80450.1 | Thale cress | nucleus, plastid | 34.95 | 36.72 |
| CDX79386 | Canola | plastid | 33.87 | 36.63 |
| VIT_04s0008g06930.t01 | Wine grape | cytosol | 36.02 | 36.61 |
| Bra003566.1-P | Field mustard | nucleus | 32.26 | 34.68 |
| VIT_19s0014g02490.t01 | Wine grape | nucleus, plastid | 38.17 | 33.81 |
| VIT_00s0527g00020.t01 | Wine grape | cytosol, nucleus, plastid | 29.03 | 32.93 |
| GSMUA_Achr3P19850_001 | Banana | nucleus | 35.48 | 32.04 |
| CDY38669 | Canola | nucleus | 33.33 | 31.96 |
Protein Annotations
| ArrayExpress:VIT_09s0002g07540 | EMBL:FN596494 | EnsemblPlants:VIT_09s0002g07540.t01 | EnsemblPlantsGene:VIT_09s0002g07540 | EntrezGene:100244079 | EntrezGene:LOC100244079 |
| InterPro:VQ | PANTHER:PTHR33402 | PANTHER:PTHR33402:SF3 | PFAM:PF05678 | ProteinID:CCB59639 | ProteinID:CCB59639.1 |
| RefSeq:XP_002263563 | RefSeq:XP_002263563.1 | RefSeq:XP_010654822.1 | SEG:seg | UniParc:UPI0001983FBD | UniProt:F6HXG9 |
| wikigene:100244079 | wikigene:LOC100244079 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr9:-:7625485..7626065
Molecular Weight (calculated)
20069.7 Da
IEP (calculated)
10.636
GRAVY (calculated)
-0.518
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNLASPPF AHDHSSSSNN TTFVQADPSN FRAVVQHLTG ASPDSASPKL PVTLPTRLAA PRPTSADMGP RRPPFKLHER RQSVRKLEIK LGNAIAPSST
101: APSPSSVRHR GFVGLGGEMM MVSPVSPLEL FSPRTPRSPV EEEERAIAEK GFYLHPSPLS TPRTSEPELL PLFPLHSPRD HSSSSS
101: APSPSSVRHR GFVGLGGEMM MVSPVSPLEL FSPRTPRSPV EEEERAIAEK GFYLHPSPLS TPRTSEPELL PLFPLHSPRD HSSSSS
001: MSHQQPPSYA TEPNTMFVQA DPSNFRNIVQ KLTGAPPDIS SSSFSAVSAA HQKLPLTPKK PAFKLHERRQ SSKKMELKVN NITNPNDAFS HFHRGFLVSP
101: VSHLDPFWAR VSPHSAREEH HAQPDKEEQK AIAEKGFYFL PSPRSGSEPA PELLPLFPLR SPNGTNHRIH EDNHRDS
101: VSHLDPFWAR VSPHSAREEH HAQPDKEEQK AIAEKGFYFL PSPRSGSEPA PELLPLFPLR SPNGTNHRIH EDNHRDS
Arabidopsis Description
VQ11VQ motif-containing protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.