Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0002g07540.t01 | Wine grape | plastid | 36.61 | 36.02 |
| VIT_19s0014g02490.t01 | Wine grape | nucleus, plastid | 34.43 | 30.0 |
| VIT_00s0527g00020.t01 | Wine grape | cytosol, nucleus, plastid | 25.68 | 28.66 |
Protein Annotations
| ArrayExpress:VIT_04s0008g06930 | EMBL:FN595231 | EnsemblPlants:VIT_04s0008g06930.t01 | EnsemblPlantsGene:VIT_04s0008g06930 | EntrezGene:100242247 | EntrezGene:LOC100242247 |
| InterPro:VQ | PANTHER:PTHR33402 | PANTHER:PTHR33402:SF4 | PFAM:PF05678 | ProteinID:CCB46882 | ProteinID:CCB46882.1 |
| RefSeq:XP_002283416 | RefSeq:XP_002283416.1 | SEG:seg | UniParc:UPI0001983021 | UniProt:F6H353 | wikigene:100242247 |
| wikigene:LOC100242247 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:6981379..6982113
Molecular Weight (calculated)
19887.5 Da
IEP (calculated)
10.801
GRAVY (calculated)
-0.588
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTRRLHYTV SSPPTPPPTS TTFVQADATT FRDLVQKLTG AAVDSPEKLP VTLPVRASAR PNSVDSSTGP RRSPFKLQER RHTMRKLEIK LGITTLRNSP
101: FPHSPRVVSP TPSPVTPLSS ESMFSGRAGS SGGESPASEE ERAIAEKGFY FLPSPMSTPR GSELPELLTL FPLSSPSQRT RDS
101: FPHSPRVVSP TPSPVTPLSS ESMFSGRAGS SGGESPASEE ERAIAEKGFY FLPSPMSTPR GSELPELLTL FPLSSPSQRT RDS
001: MSHQQPPSYA TEPNTMFVQA DPSNFRNIVQ KLTGAPPDIS SSSFSAVSAA HQKLPLTPKK PAFKLHERRQ SSKKMELKVN NITNPNDAFS HFHRGFLVSP
101: VSHLDPFWAR VSPHSAREEH HAQPDKEEQK AIAEKGFYFL PSPRSGSEPA PELLPLFPLR SPNGTNHRIH EDNHRDS
101: VSHLDPFWAR VSPHSAREEH HAQPDKEEQK AIAEKGFYFL PSPRSGSEPA PELLPLFPLR SPNGTNHRIH EDNHRDS
Arabidopsis Description
VQ11VQ motif-containing protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.